Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1974 |
Symbol | |
ID | 3716247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 2250228 |
End bp | 2250839 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | lytic transglycosylase, catalytic |
Protein accession | YP_347706 |
Protein GI | 77458201 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.677118 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCATT CATTCACTGC AGGACTGCTC GGCTGCGTGC TGTCGGTCGG TGTCGCGCAA GCCGATGTCT TCGTTTCCAT GGACGCCAAG GGCAGCTACG TGCTGTCCAA CGTCCACCGT CCCGGACGCA CTTACGAGCG GGTGATTCGC GAGTCCGATG CGCCGCTGGT CAGCCTTGAC CGGCAACCGC AATTGATCGC CAACCAGCCC TACGCCGAGC TGGTGTCAGC GGCGGCCAGC GCCAATCACC TGCCCGAGGC TTTGCTGCAC GCGGTGATCA AGTCCGAATC CAATTACAAC CCCGGTGCCA CCTCGCCCAA GGGCGCCGGC GGACTGATGC AATTGATGCC CGACACCGCC CGCGAGCTGG GGGTGAAAGA TGTCTACGAC CCCAAGGCCA ACATCCAGGG CGGGGCCAAA TACCTCAAGC GCCTGATGAC CCTGTTCGAC AACGACATCG CCCTGGCCGT AGCGGCCTAC AACGCCGGGC CTGACGCGGT GCTCAGCCGC GGCCGGGTGA TTCCTCCGTT CGCCGAAACC CAGCGCTATG TCCCGAGCGT GCTGCGTCAG TACCGGCGCC TGCAGGGGCT GGCGGTGGAT GCACCGTTGT AA
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Protein sequence | MIHSFTAGLL GCVLSVGVAQ ADVFVSMDAK GSYVLSNVHR PGRTYERVIR ESDAPLVSLD RQPQLIANQP YAELVSAAAS ANHLPEALLH AVIKSESNYN PGATSPKGAG GLMQLMPDTA RELGVKDVYD PKANIQGGAK YLKRLMTLFD NDIALAVAAY NAGPDAVLSR GRVIPPFAET QRYVPSVLRQ YRRLQGLAVD APL
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