| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1958 |
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| Symbol | |
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| ID | 3716270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 2233013 |
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| End bp | 2235799 |
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| Gene Length | 2787 bp |
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| Protein Length | 928 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | |
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| Product | transcriptional regulator |
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| Protein accession | YP_347690 |
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| Protein GI | 77458185 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGTCTTT CCCCGAATCA GGCCATCGGT TTCGGCCCCT ATCGGATCCA CCCCGGCCAG
CGGCTGGTGC TTGAAGGCGA CCAGCCTTTG CGCCTGGGCC GGCGCGCCAT GGACATTCTG
CTGATCCTGC TGGCCCATGC CGGCGAGGTC GTGAGCAAGC AACAGTTGAT CGCCGGAGTC
TGGCCCGACA GCGTGGTGGA GGACATCAAT CTGCGGGTGC ACATGGCCGC GCTGCGCAAG
GCGCTCGGTG ACGGTCAGGC CGGGCAGCGC TACATCGTCA CGGTGGCGCA GCGCGGATAC
AGTTTCGTCG CGCCGGTCGT GCTGCAATCG ATTGAACAAC GTCCCACCAC CGCCAACCTC
GGCCGGCATA ACCTGCCGCT GCGCCGCACG CGGATGATCG GGCGCCAGTC GGTGGTCGAC
AGCCTGATGA CGCAACTGCC GCGCCAGCGC TGCATCACCC TGGTCGGCCC CGGCGGCATC
GGCAAGACCA CCGTGGCCCT GCGTGTCGCC GAGCAACTGA TCGGCCGTTA TCGCGACGGT
ATTCGTCTGC TGGATCTGGC CCCGCTCAAA CATCCGGGCT CGATCTGCTC GCACCTCGCC
GCCCTGCTGG ACCTTTCGCT GCACGATGGT GAACCGATGG CCTGCCTGAT CAACAGCCTG
CGCGAGCGGC AGATGCTGCT GGTAATCGAC AACTGCGAGC ACTTGATCGA CGCCGTCGCG
CTGCTCAGCG AAAGCATTCT GCGTGGCGCG CCGCAGGTGC ACATTCTGGC CACCAGCCGC
GAAAGCCTGC GCGCCGAGGG CGAGTATGTG CAGCGCCTGG AATCCCTCGA CTGCCCGCCG
CCGATTGCGG TGCTGGATCG CGATCAGGCG ATGGAATTCT CCGCGCTGCA GTTGTTCGTC
GAACGGGCGA TGGCGGCCCA CGAACATTTT GAGCCGGGTA ATGCCGACCT GCCCTTGATC
ATCGACATCT GTCGGCGACT GGACGGCATC CCGCTGGCAC TGGAACTGGC CGCTGCGCAG
GTCGCGGGTC TTGGGCTGGA GGGTTTGCTG AGTCAGCTCC AGGGGCGTTT GCCGGCTGGC
AACCAGACTC GCCTCGGTCG GCATGAAACC CTGCGCGCTA CGCTGGACTG GAGCTTCAAT
CTGCTCAATG CCTGCGAACA GACCGGCCTG CGCCGACTGG GTGTATTCCG TGGCGCGTTC
ACGCTGGAAT CGGCGGCGGC GGTTATCGTC GGTCAGCACA TCGAGCCGAA CGAAGTCTTC
GCTTCGATCA CGCAACTGGT CGCCAAGTCG CTGCTCAACG TCGAGGTCGG CGATGAAGAA
GTGTTCTATC GCCTGCTCGA CACCACCCGC CGCTATGCGC TGGAAAAACT CGACCAGGCC
GCCGAACTCG GCGAAACCCG CGAACGCCAT GCCGAACGCA GCCTGGCGCT GATGTATCAG
GCCCAGGCCG ATTGGGAGAA CACGGCGACT GAAGTCTGGA TCGAGCGTTA CGCCCGTGGC
CTTGAAGACT TGCGGGCGGC CCTTGAGTGG ACGCTGAATG ACGAAGGCTC GCGCGCGCTC
GGCGTTCGAC TGACGGCGAC CTCGGCGCCG TTGTGGCAGG AACTGTCCTT GCTCAAGGAG
TACGGCGTTC ATGTGCGCCG GGCACTGGCG CTGCTGGCTT CATCCGACGA GCCCTGCCCG
CGACTGGAAA TCGCCTTGAA ACTGGCCCTG GGCAGCGCCT GTTACCACAC CTGGGGCGGC
ACGCCGGAAA CCATCGAGGC CTTCGTCAGC GCCCGGCTGC TGGCACAACA GCACGACGAC
ATGGCCGGTC AGTTGCGCGC CGTGTCGGGG CACATGGCGG TCAATCTCAG TTGCGGGCAT
TACCGGATGG CACTGGAGCA GAGCGAGCAA TTCGAAAGTC TCGGAGTGCA CGGCGATGCG
CAGCTGTCCC TGAGTACCCA CCGCTTGCGG GTGCTCGCGC TGCATTACGC CGGCGATCAG
CACCAGGCGC GAATCCACGC CGAGCAAGTC ATTCAGCGCA TGGCCCACAG CGGCCACCTC
AACCGCTTCA CTCACGGTTT CGGCGTGCAA TACGACCAGA GCGTCGCTTC GCTGACCGTC
CTTGCCCGTG TGCTGTGGTT GCAAGGTTTC CCCGAGCAAG CCTGGCGTAC AGCACGGCAG
GCGCTGGACA TCGCGGTGCA GATCAATCAC GGCACCTCGA TCTGCTACAC CCTGGCACTC
GCTTCGTGCC TGATCGCCCA TTACAACGGA GATACACAGA ACGCCCGGGC GCTGCTGCAA
CTGTTGCTCG AACAGGCGCA GAAGCATTCG GTGCTGCTGT TCTACACGTG GGCGCGGCAC
TACGCACAGG TGATCGACGC CGACAAATCC CCCGCCATCC CGCCCGCCGA CAGCGGTCTG
GTCAGGGAAA TCATGGTCAC GCTGGATCCA GGCTTCGTTG ACGATGCCCT GCTTGAACGA
GCACAAAGCG GCGCGGCCGG CTGGAGTACT GCGGAGATTT TGCGGGCCCG GGCCGAGCGA
TTGCTGGCCG GTGAATCGCC CTGTCATCAC ACGGTCGAAA GCGCCTTGCA GCAATCGCTC
AAGATTGCCC GGACTCAAGG TGCCCTGGCC TGGGAGTTGC GCAGCGCGAC TTCGCTGGCA
CAGTGGTGGC AGCGCCAGTC GCGTTATCGT GAGGCTATCG AATTGCTGGC GCCGGTCTAC
CAGCGCTTCA CCGAAGGCTA TGCCACCCCG GACTTGCGCA AAGTGCGCTT ACTGCTCGAC
GAACTGCGCG GTCAGTCGGC CGCTTGA
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| Protein sequence | MSLSPNQAIG FGPYRIHPGQ RLVLEGDQPL RLGRRAMDIL LILLAHAGEV VSKQQLIAGV
WPDSVVEDIN LRVHMAALRK ALGDGQAGQR YIVTVAQRGY SFVAPVVLQS IEQRPTTANL
GRHNLPLRRT RMIGRQSVVD SLMTQLPRQR CITLVGPGGI GKTTVALRVA EQLIGRYRDG
IRLLDLAPLK HPGSICSHLA ALLDLSLHDG EPMACLINSL RERQMLLVID NCEHLIDAVA
LLSESILRGA PQVHILATSR ESLRAEGEYV QRLESLDCPP PIAVLDRDQA MEFSALQLFV
ERAMAAHEHF EPGNADLPLI IDICRRLDGI PLALELAAAQ VAGLGLEGLL SQLQGRLPAG
NQTRLGRHET LRATLDWSFN LLNACEQTGL RRLGVFRGAF TLESAAAVIV GQHIEPNEVF
ASITQLVAKS LLNVEVGDEE VFYRLLDTTR RYALEKLDQA AELGETRERH AERSLALMYQ
AQADWENTAT EVWIERYARG LEDLRAALEW TLNDEGSRAL GVRLTATSAP LWQELSLLKE
YGVHVRRALA LLASSDEPCP RLEIALKLAL GSACYHTWGG TPETIEAFVS ARLLAQQHDD
MAGQLRAVSG HMAVNLSCGH YRMALEQSEQ FESLGVHGDA QLSLSTHRLR VLALHYAGDQ
HQARIHAEQV IQRMAHSGHL NRFTHGFGVQ YDQSVASLTV LARVLWLQGF PEQAWRTARQ
ALDIAVQINH GTSICYTLAL ASCLIAHYNG DTQNARALLQ LLLEQAQKHS VLLFYTWARH
YAQVIDADKS PAIPPADSGL VREIMVTLDP GFVDDALLER AQSGAAGWST AEILRARAER
LLAGESPCHH TVESALQQSL KIARTQGALA WELRSATSLA QWWQRQSRYR EAIELLAPVY
QRFTEGYATP DLRKVRLLLD ELRGQSAA
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