Gene Pfl01_1936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1936 
SymbolpheT 
ID3716285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2204729 
End bp2207107 
Gene Length2379 bp 
Protein Length792 aa 
Translation table11 
GC content61% 
IMG OID 
Productphenylalanyl-tRNA synthetase subunit beta 
Protein accessionYP_347668 
Protein GI77458163 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0927196 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCA GTGAACAATG GCTGCGTGGC TGGGTCAGCC CGCAGGTAGA TCGCGACGCG 
CTGGTTGCCC GTCTGTCGAT GGCCGGTCTT GAGGTTGATA GCGTTACGCC GGCCGCCGGT
GTTTTCAGTG GCGTGGTTGT GGGCGAGGTG CTGAGCACCG AGCAGCACCC CGATGCCGAC
AAATTGCGCG TTTGCCAGGT CAGCAATGGC GCGGAAACTT TCCAGGTTGT GTGTGGTGCG
CCAAACGTGC GTCCGGGCCT GAAAATTCCG TTCGCGATGA TCGGTGCCGA GCTGCCGGGC
GACTTCAAGA TCAAGAAGGC CAAGCTGCGC GGCGTCGAGT CCAACGGCAT GCTGTGCTCG
CAAGCCGAAC TTCAGATCGG CGAAGGCAAT GACGGTCTGA TGGAGCTGCC GGCTGATGCG
TCGGTGGGCG AAGATTTTCG TGTTTATCTG GACCTGGAAG ACGCCAGCAT CGAAGTCGAT
CTGACTCCGA ACCGTGGCGA CTGCCTGTCC CTGGCCGGTC TGGCCCGTGA AGTCGGCGCG
CTGTACGACG CACCGGTCAC TCGCCCGGTG GTGATGGCTG TTCCTGCAGC GCACGACGAA
GTGCGCTCCG TCGAAGTTCT GGCACCTGCT GCCTGCCCGC GTTATCTGGG TCGGGTCATC
CGTAACGTTG ACCTGTCCAG ACCGACTCCG CTGTGGATGG TTGAGCGCCT GCGTCGCGCC
GAAGTCCGCA GCATCGACGC CGCCGTCGAC ATCACCAACT ACGTGATGCT CGAGCTGGGT
CAGCCGCTGC ACGCTTTCGA TCTCGCCGAA ATCAACGGCG GCATCCGTGT TCGCATGGCG
GAAGAGGGCG AGAAGCTCGT GCTGCTCGAC GGTCAGGAAG TCAGCCTGCG TAGCGATACG
CTGGTGGTCG CCGACCACAC TCGCGCTCTG GCCATTGCCG GCGTGATGGG TGGCGAGCAC
AGCGGTGTTT CTGCGACCAC TCGCGACGTA TTTCTTGAAA GTGCGTTCTT CGACCAGATC
GCGGTGGCGG GCAAGGCTCG TTCCTACGGC CTGCACACCG ACGCTTCGCA CCGCTACGAA
CGCGGTGTGG ACTGGCAACT GGCCCGTGAA GCCATGGAGC GCGCCACTGG CCTGCTGCTG
GAAATCACCG GTGGCGAAGC CGGCCCGATC ATCGAAACCG TCAGCGAGCA GCACTTGCCG
TCGATCGCGC CGATCACCCT GCGTGCGCAG CGCATCACTC AGATGCTGGG CATGGAAATG
GATTCGGCCG AAGTCGAGCG CCTGCTCAAT GCTTTGGGTT TGAAGGTTTC CGCCGACGGA
GCAGGGCAGT GGCGCGTAGA AGTGCCGAGC CATCGCTTCG ATATCAGTCT GGAAGTCGAT
CTGATCGAAG AGCTGGCGCG TCTGTACGGT TACAACCGCC TGCCGGTTCG TTACCCGCAA
GCTCGTCTGG CGCCACAGGC CAAGGCTGAA GCGCGCAGCG ATCTGCCGGA GCTGCGTCGT
CTGCTGGTCG CTCGTGGTTA CCAGGAAGCG ATCACTTACA GCTTCATCGA TCCGAAGCAG
TTCGAGCTGT TCAACCCGGG CGTCGAGCCG CTGCTGTTGG CGAACCCGAT CTCCAATGAC
ATGGCCGCCA TGCGTTCGTC GCTGTGGCCG GGTCTGGTCA AGGCGCTGCA GCACAACCTC
AACCGTCAGC AGGATCGTGT TCGTCTGTTC GAGAGCGGTC TGCGCTTCGT CGGTCAGCTG
GAAGGTCTGA AGCAAGAACC GATGATCGCC GGTGTGGTGT GCGGCAGCCG TCTGCCGGAA
GGCTGGGCGC AAGGCCGCGA TACCGTCGAC TTCTTCGACG TCAAGGCTGA CGTAGAAGCG
GTGCTGGGCT TTGCCGGTGC GCTGGATCAG TTTACTTTTG CACCGGGCAA GCACCCTGCA
CTGCATCCAG GCCAGACCGC ACGCATCGAG CGGGAAGGGC GTGAAGTCGG CTTTATCGGC
GCGATTCACC CTGAGCTGTC GAAATCCCTG GGTCTCGACC GTCCGGTCTT CGTCTTCGAG
CTGGTTCTGG CTGAAGTCGC TCTGGGGAAG ATGCCGAAAT TCCACGAGTT GTCGCGCTTT
CCTGAAGTGC GTCGTGACCT GGCACTGATT GCGCACAAAG ACGTTGCAGC CTCGGCTGTA
CTGGACGTAA TCCGTGAAAA TGCAGGCGAA TGGCTGACAG ACCTCAGGCT ATTTGACGTG
TATCAGGGTA AAGGCATTGA TACTGATAGA AAAAGCCTCG CAGTCGGCTT GACCTGGCAG
CATCCATCGC GCACTCTTAA TGACGATGAG GTGAATTCGA CGACGCAAAA TATCCTCACC
TCGCTCGAAC AAAGGTTGAA CGCCACGTTA AGGAAGTGA
 
Protein sequence
MKFSEQWLRG WVSPQVDRDA LVARLSMAGL EVDSVTPAAG VFSGVVVGEV LSTEQHPDAD 
KLRVCQVSNG AETFQVVCGA PNVRPGLKIP FAMIGAELPG DFKIKKAKLR GVESNGMLCS
QAELQIGEGN DGLMELPADA SVGEDFRVYL DLEDASIEVD LTPNRGDCLS LAGLAREVGA
LYDAPVTRPV VMAVPAAHDE VRSVEVLAPA ACPRYLGRVI RNVDLSRPTP LWMVERLRRA
EVRSIDAAVD ITNYVMLELG QPLHAFDLAE INGGIRVRMA EEGEKLVLLD GQEVSLRSDT
LVVADHTRAL AIAGVMGGEH SGVSATTRDV FLESAFFDQI AVAGKARSYG LHTDASHRYE
RGVDWQLARE AMERATGLLL EITGGEAGPI IETVSEQHLP SIAPITLRAQ RITQMLGMEM
DSAEVERLLN ALGLKVSADG AGQWRVEVPS HRFDISLEVD LIEELARLYG YNRLPVRYPQ
ARLAPQAKAE ARSDLPELRR LLVARGYQEA ITYSFIDPKQ FELFNPGVEP LLLANPISND
MAAMRSSLWP GLVKALQHNL NRQQDRVRLF ESGLRFVGQL EGLKQEPMIA GVVCGSRLPE
GWAQGRDTVD FFDVKADVEA VLGFAGALDQ FTFAPGKHPA LHPGQTARIE REGREVGFIG
AIHPELSKSL GLDRPVFVFE LVLAEVALGK MPKFHELSRF PEVRRDLALI AHKDVAASAV
LDVIRENAGE WLTDLRLFDV YQGKGIDTDR KSLAVGLTWQ HPSRTLNDDE VNSTTQNILT
SLEQRLNATL RK