Gene Pfl01_1925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1925 
Symbol 
ID3716311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2197021 
End bp2198049 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content59% 
IMG OID 
Productinosine/uridine-preferring nucleoside hydrolase 
Protein accessionYP_347657 
Protein GI77458152 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0103421 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCGCT ATGCTCAAAA ATTGCATCAA TTGATTCGGG GGCTGCTGCT TTTGTCCGTG 
ATAACCGCGA CCGGCGCCCA GGCGGCGGAA AAGATCGACC TGATCATTGA CACCGATCCG
GGTGCCGACG ACGTGGTCGC CCTGTTGTTT GCCCTGGCCT CCCCGGAAGA GCTGAACATT
CGCGCGTTGA CCACCGTGGC CGGCAATGTG CGTCTGGACA AGACTTCGCG CAATGCCAGG
TTGGCCCGTG AGTGGGCTGG GCGGGAAGAT ATTCCGGTGT ACGCCGGGGC GCCAAAACCG
CTGATGCGCA CGCCGATCTA CGCTGAAAAC ATCCATGGCA AGGAAGGCCT GTCGGGTGTC
ACCGTGCATG AGCCGAAGAA AGGCCTGGCC GAAGGCAATG CGGTCAACTA TCTGATCGAC
ACCCTGAAAA AAGCCAAGCC GCACAGCATC ACCATCGCGA TGCTCGGCCC GCAGACCAAC
CTGGCCCTGG CGCTGATCCA GGAGCCGGAG ATCGTTCAGG GCATCAAGGA AGTCGTGATC
ATGGGGGGCG CTCACTTCAA TGGCGGCAAC ATCACGCCAG TGGCCGAATT TAACTTGTAC
GCCGACCCGC AAGCCGCGGA AGTTGTGCTC AAAAGCGGCG TGAAACTGAC TTATCTGCCG
CTGGACGTGA CCCACAAGAT CCTCACCAGT GACGCACGCC TGAAGCAGAT TGCGGCGCTG
AACAACAATG CGAGCAAGAT TGTCGGCGAC ATCCTCAACG AGTACATCAA AGGGGATATG
GAGCACTACG GCATTCCGGG TGGCCCGGTG CATGACGCCA CCGTCGTGGC TTATCTGCTC
AAGCCTGAAC TCTTCACGGG TCGTTCGGTG AATGTGGTGG TCGATAGCCG TGAAGGCCCG
ACATTCGGCC AGACCATTGT CGACTGGTAT GACGGCCTGA AGGCGCCGAA GAACGCTTTC
TGGGTGGAGA ACGGCGATGC CCAAGGCTTC TTCGATCTGC TGACCGAGCG TCTGAAGCGT
CTGAAGTAA
 
Protein sequence
MHRYAQKLHQ LIRGLLLLSV ITATGAQAAE KIDLIIDTDP GADDVVALLF ALASPEELNI 
RALTTVAGNV RLDKTSRNAR LAREWAGRED IPVYAGAPKP LMRTPIYAEN IHGKEGLSGV
TVHEPKKGLA EGNAVNYLID TLKKAKPHSI TIAMLGPQTN LALALIQEPE IVQGIKEVVI
MGGAHFNGGN ITPVAEFNLY ADPQAAEVVL KSGVKLTYLP LDVTHKILTS DARLKQIAAL
NNNASKIVGD ILNEYIKGDM EHYGIPGGPV HDATVVAYLL KPELFTGRSV NVVVDSREGP
TFGQTIVDWY DGLKAPKNAF WVENGDAQGF FDLLTERLKR LK