Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1925 |
Symbol | |
ID | 3716311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 2197021 |
End bp | 2198049 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | inosine/uridine-preferring nucleoside hydrolase |
Protein accession | YP_347657 |
Protein GI | 77458152 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0103421 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCACCGCT ATGCTCAAAA ATTGCATCAA TTGATTCGGG GGCTGCTGCT TTTGTCCGTG ATAACCGCGA CCGGCGCCCA GGCGGCGGAA AAGATCGACC TGATCATTGA CACCGATCCG GGTGCCGACG ACGTGGTCGC CCTGTTGTTT GCCCTGGCCT CCCCGGAAGA GCTGAACATT CGCGCGTTGA CCACCGTGGC CGGCAATGTG CGTCTGGACA AGACTTCGCG CAATGCCAGG TTGGCCCGTG AGTGGGCTGG GCGGGAAGAT ATTCCGGTGT ACGCCGGGGC GCCAAAACCG CTGATGCGCA CGCCGATCTA CGCTGAAAAC ATCCATGGCA AGGAAGGCCT GTCGGGTGTC ACCGTGCATG AGCCGAAGAA AGGCCTGGCC GAAGGCAATG CGGTCAACTA TCTGATCGAC ACCCTGAAAA AAGCCAAGCC GCACAGCATC ACCATCGCGA TGCTCGGCCC GCAGACCAAC CTGGCCCTGG CGCTGATCCA GGAGCCGGAG ATCGTTCAGG GCATCAAGGA AGTCGTGATC ATGGGGGGCG CTCACTTCAA TGGCGGCAAC ATCACGCCAG TGGCCGAATT TAACTTGTAC GCCGACCCGC AAGCCGCGGA AGTTGTGCTC AAAAGCGGCG TGAAACTGAC TTATCTGCCG CTGGACGTGA CCCACAAGAT CCTCACCAGT GACGCACGCC TGAAGCAGAT TGCGGCGCTG AACAACAATG CGAGCAAGAT TGTCGGCGAC ATCCTCAACG AGTACATCAA AGGGGATATG GAGCACTACG GCATTCCGGG TGGCCCGGTG CATGACGCCA CCGTCGTGGC TTATCTGCTC AAGCCTGAAC TCTTCACGGG TCGTTCGGTG AATGTGGTGG TCGATAGCCG TGAAGGCCCG ACATTCGGCC AGACCATTGT CGACTGGTAT GACGGCCTGA AGGCGCCGAA GAACGCTTTC TGGGTGGAGA ACGGCGATGC CCAAGGCTTC TTCGATCTGC TGACCGAGCG TCTGAAGCGT CTGAAGTAA
|
Protein sequence | MHRYAQKLHQ LIRGLLLLSV ITATGAQAAE KIDLIIDTDP GADDVVALLF ALASPEELNI RALTTVAGNV RLDKTSRNAR LAREWAGRED IPVYAGAPKP LMRTPIYAEN IHGKEGLSGV TVHEPKKGLA EGNAVNYLID TLKKAKPHSI TIAMLGPQTN LALALIQEPE IVQGIKEVVI MGGAHFNGGN ITPVAEFNLY ADPQAAEVVL KSGVKLTYLP LDVTHKILTS DARLKQIAAL NNNASKIVGD ILNEYIKGDM EHYGIPGGPV HDATVVAYLL KPELFTGRSV NVVVDSREGP TFGQTIVDWY DGLKAPKNAF WVENGDAQGF FDLLTERLKR LK
|
| |