Gene Pfl01_1878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1878 
SymbolgltX 
ID3716358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2142449 
End bp2143993 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content61% 
IMG OID 
Productglutamyl-tRNA synthetase 
Protein accessionYP_347610 
Protein GI77458105 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGCCTG TTACCATTCG CCGCTTGATC GTTCTTTGCT TTTCATTCTT TTCGAGACAT 
GCCATGACCA CCGTCCGCAC TCGCATCGCG CCATCGCCTA CCGGGGATCC CCACGTAGGT
ACCGCTTACA TCGCACTGTT CAACTACTGC TTTGCCAAGC AGCACGGCGG TGAGTTCATC
CTGCGGATCG AAGACACCGA TCAATTGCGT TCGACCCGCG AGTCCGAACA GCAGATCTTC
GACGCCCTGC GCTGGCTGGG TATCGACTGG AGCGAAGGCC CGGACGTCGG CGGCCCGCAC
GGCCCGTACC GTCAGAGCGA GCGCGGCGAT ATCTATCAGA AGTATTGCCA GCAACTGGTC
GACATGGGCC ACGCCTTCCC GTGCTTCTGC ACCGCTGAAG AGCTGGACCA GATGCGCGCC
GAGCAAATGG CGCGCGGCGA AACCCCGCGT TACGACGGCC GTGCACTGTT GCTGTCCAAG
GAAGAAGTCG CCCGGCGCCT GGCTGCCGGC GAGCCGCACG TGATCCGCAT GAAGGTGCCG
AGCGAAGGCG TCTGCGTGGT GCCGGACATG CTGCGTGGCG ATGTCGAGAT CCCGTGGGAT
CGCATGGACA TGCAAGTGCT GATGAAGACC GACGGCCTGC CGACGTACTT CCTGGCCAAC
GTGGTCGACG ATCACCTGAT GGGCATCACT CACGTGCTGC GCGGCGAAGA ATGGTTGCCG
TCGGCGCCGA AACTGATCCT GCTTTACGAG TATTTCGGCT GGGAACAACC GGAGCTGTGC
TACATGCCGC TGCTGCGTAA CCCGGACAAG AGCAAGCTGT CCAAGCGCAA GAACCCGACT
TCGGTGACGT TCTACGAGCG CATGGGTTTC ATGCCTGAGG CGATGCTTAA CTACCTGGGC
CGCATGGGCT GGTCGATGCC GGACGAGCGC GAGAAGTTCT CGCTGCAGGA AATGGTCGAC
AACTTCGACC TCAAGCGCGT GTCGCTGGGT GGGCCGATTT TCGATATCGA GAAGCTGTCG
TGGCTCAACG GCCAGTGGCT GCGTGATCTG CCGGTGGAAG AGTTCGCCGC TCGCGTTCAG
AAGTGGGCGT TCAACTCCGA GTACATGATG AAGATCGCGC CGCATGTTCA GGGCCGTGTC
GAAACCTTCA GCCAGGTTGC ACCGCTGGCC GGGTTCTTCT TCGCCGGTGG CGTGAACCCG
GATGCCAAGC TGTTCGAATC GAAAAAGCTT TCGGGCGATC AGGTTCGTCA GTTGATGCAA
TTGATCCTGT GGAAGCTGGA AAGCCTGCGT CAGTGGGAGA AGGACAGCAT CACCGCGACG
ATTCAGGCGG TGGTCGAATC CCTCGAGCTC AAGCTGCGTG ATGCGATGCC GCTGATGTTT
GCCGCGATTA CCGGGCAGGC GAGTTCGGTG TCGGTGCTCG ATGCGATGGA AATCCTCGGG
CCGGACCTGA CCCGTTTCCG TCTGCGCCAG GCGATTGACC TGCTGGGCGG CGTGTCGAAG
AAAGAAAACA AAGAGTGGGA AAAGCTGTTG GGCGCCATCG CCTGA
 
Protein sequence
MSPVTIRRLI VLCFSFFSRH AMTTVRTRIA PSPTGDPHVG TAYIALFNYC FAKQHGGEFI 
LRIEDTDQLR STRESEQQIF DALRWLGIDW SEGPDVGGPH GPYRQSERGD IYQKYCQQLV
DMGHAFPCFC TAEELDQMRA EQMARGETPR YDGRALLLSK EEVARRLAAG EPHVIRMKVP
SEGVCVVPDM LRGDVEIPWD RMDMQVLMKT DGLPTYFLAN VVDDHLMGIT HVLRGEEWLP
SAPKLILLYE YFGWEQPELC YMPLLRNPDK SKLSKRKNPT SVTFYERMGF MPEAMLNYLG
RMGWSMPDER EKFSLQEMVD NFDLKRVSLG GPIFDIEKLS WLNGQWLRDL PVEEFAARVQ
KWAFNSEYMM KIAPHVQGRV ETFSQVAPLA GFFFAGGVNP DAKLFESKKL SGDQVRQLMQ
LILWKLESLR QWEKDSITAT IQAVVESLEL KLRDAMPLMF AAITGQASSV SVLDAMEILG
PDLTRFRLRQ AIDLLGGVSK KENKEWEKLL GAIA