Gene Pfl01_1868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1868 
Symbol 
ID3716382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2131194 
End bp2131988 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content61% 
IMG OID 
Productexodeoxyribonuclease III 
Protein accessionYP_347600 
Protein GI77458095 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0445089 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TGCGCATTGC CACGTTCAAC GTCAACGGCC TGCGTGCCCG TCTGCCAAAT 
CTGCTGGAAT GGCTCAGGCG CGAGCAGCCG GACATCGTCT GTCTGCAAGA GCTCAAGATG
CTGGACAGCG CGTTTCCCGC TGCTGATCTG GAGGCCGCCG GCTACGGTGC CATCTGGCAC
GGTCAGGCGT CTTGGAACGG GGTGGCGATT CTTGCCCGCG ATGCGCAACC GCTGGAGAGC
CGGCGCGGTT TGCCCGGCGA TCCCGACGAT AAGCACAGCC GCTACCTCGA AGCGGCGGTG
CATGGAGTGT TGGTGGGGTG CCTGTATCTG CCCAATGGCA ATCCGCAACC TGGGCCGAAG
TTCGACTACA AGCTGGCCTG GTTCGAGCGT CTGATCAAAT ACGCCCGGGA TCTGCAAAGC
AGCGATCACC CGGTGGTGCT GGCCGGCGAT TACAACGTGG TGCCCACCGA TCTGGATATC
TACAACACCC GTTCGTGGCT CAAGGATGCG TTGTTGCAAC CGGAGAGCCG CGAGTGCTAT
CAGCGCCTGC TGGATCAGGG CTGGACGGAC TCTTTGCGGC ATCTGTATCC CGAAGATCGG
CTGTACACGT TCTGGGACTA TTTCCGTCAG CACTGGCAGA AGAACTCCGG GCTGCGGATC
GACCATCTGC TGCTCAATCC GACACTGAGC CCTTATCTGC ACGAGGCCGG TGTGGATGCC
TGGGTGCGCA ACGAACCGCA CGCCAGCGAC CACGCGCCGA CATGGATTCG CATCGGTTCG
CGTAAAAGAC GCTAG
 
Protein sequence
MKKMRIATFN VNGLRARLPN LLEWLRREQP DIVCLQELKM LDSAFPAADL EAAGYGAIWH 
GQASWNGVAI LARDAQPLES RRGLPGDPDD KHSRYLEAAV HGVLVGCLYL PNGNPQPGPK
FDYKLAWFER LIKYARDLQS SDHPVVLAGD YNVVPTDLDI YNTRSWLKDA LLQPESRECY
QRLLDQGWTD SLRHLYPEDR LYTFWDYFRQ HWQKNSGLRI DHLLLNPTLS PYLHEAGVDA
WVRNEPHASD HAPTWIRIGS RKRR