| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1857 |
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| Symbol | |
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| ID | 3716371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 2115751 |
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| End bp | 2116923 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | |
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| Product | secretion protein HlyD |
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| Protein accession | YP_347589 |
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| Protein GI | 77458084 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.779454 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGTC CCCGCCCCGC CCGACGCGCC CTGCTCATCG CCCTTTGCCT TATCCCCGTC
ATTGCTATTG CCGCCTGGCA GGTGTTGCCG CCCGGTCGGG ACAAATTCAC CACCGTGCAG
GTCTCTCGCG GCGATATAGA AAGCAGCGTG ACCGCACTCG GCACCCTCCA GCCTCGCCGG
TATGTAGATG TCGGCGCCCA GGCGTCGGGG CAGATTCGCA AGATCCACGT GGAAGTCGGC
GACGTGGTCA AGGAGGGTCA GTTGCTGGTA GAGATCGACC CGGCCACGCA AAAGGCCAAA
CTCGACGCCA GCCAGTTTTC CATCGAGAAC CTGAAGGCGC AGTTGCAGGA ACAACAGGCC
CAACATGAAC TGGCGCGTCA GAAGTATCAG CGCCAGCAGA ACCTGGCTGC CGGCGGCGCC
ACCCGTGAAG AAGACGTGCA AACCGCCCGC GCCGAACTGA AAGCCACGCA GGCGCGCATC
GACATGTTCC AGGCGCAGAT CCGTCAGGCA CAGGCGAGCC TGCGCAGCGA TCAGGCCGAG
CTCGGTTACA CCCGGATCTA CGCACCGATG GCCGGTACCG TGGTCGCACT GGACGCTCGC
GAAGGCCAGA CACTCAACGC CCAGCAACAG ACACCGCTGA TCCTGCGGAT CGCCAAGCTG
TCGCCAATGA CGGTCTGGGC TGAAGTCTCC GAAGCCGACA TCGGCCACGT CAAACCGGGC
ATGAGCGCTT ATTTCACCAC CCTCAGTGGC GGCAACCGGC GCTGGAGCAG CACCGTGCGG
CAGATCCTGC CGGTGCCGCC CAAACCGCTG GACCAGACCA GCCAGGGCGG TGGCAGCCCG
ACCAGCACCA GCAAAAGCGG TGCCGGTCGT GTGGTGCTGT ACACCGTATT GCTGGATGTC
GATAACGCCG ACAACGCGCT GATGGCGGAA ATGACCACAC AAGTGTTCTT CGTCTCCAAC
GAGGCAAAAA ACGTCCTCAC CGCACCGGTT GCCGCCCTGC ACGGCAGCGC CAAACCCGAC
AGTCAGGTTG CCCGGGTCGT GGCGCAGAAC GGCGACATTG AGCAACGCAC CGTGCGTACC
GGCATCAGCG ACCGTTTGAA GGTGCAGATT CTCGACGGTC TCAGCGAAGG CGATCATCTG
TTGATCGGCC CGGTCGACGG CAGCGGAGGC TGA
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| Protein sequence | MKRPRPARRA LLIALCLIPV IAIAAWQVLP PGRDKFTTVQ VSRGDIESSV TALGTLQPRR
YVDVGAQASG QIRKIHVEVG DVVKEGQLLV EIDPATQKAK LDASQFSIEN LKAQLQEQQA
QHELARQKYQ RQQNLAAGGA TREEDVQTAR AELKATQARI DMFQAQIRQA QASLRSDQAE
LGYTRIYAPM AGTVVALDAR EGQTLNAQQQ TPLILRIAKL SPMTVWAEVS EADIGHVKPG
MSAYFTTLSG GNRRWSSTVR QILPVPPKPL DQTSQGGGSP TSTSKSGAGR VVLYTVLLDV
DNADNALMAE MTTQVFFVSN EAKNVLTAPV AALHGSAKPD SQVARVVAQN GDIEQRTVRT
GISDRLKVQI LDGLSEGDHL LIGPVDGSGG
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