| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1852 |
|---|
| Symbol | |
|---|
| ID | 3716366 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 2107884 |
|---|
| End bp | 2109179 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | twin-arginine translocation pathway signal |
|---|
| Protein accession | YP_347584 |
|---|
| Protein GI | 77458079 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.776832 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGATC GTCGTACGTT TCTCAAGCAG GCGGGGATTC TCGCCGCCGG CCTGCCGCTG
GCCTCGGGCA TCGCCCACGG CGCCAGCACC GACAACACCA CGAATGTTGC GCCAGCGGCG
CCGGCACAGG ACAAGTGGAC GCAATTACGC ACACTGTTCG AGCAGGATCC CGACTGCCTG
CACTTCTCCA ACTTCCTGAT TACCTCGCAC CCCAGACCGG TGCGTGACGC CATCGCCCTG
CACCGCGCCG CCCTCGACAA GAACCCGGGG CTGGCGATGG ACTGGGACCT GGGCGTGATC
GAGCAGCGCG AGGAAGAGGT ACGGGTCTGG GCCGGGCGTT ATCTGCAAGC CGACGCCAGA
CAGATCGCCC TGACCGGCAG CACCACCGAG GGCCTGGCGA TGATTTACGG CGGCGCCCAT
GTGCGTGCCG ATCAGGAAAT CCTCACCACT CAACACGAAC ACTACGCCAC CCACACCATC
CTCGCGCTGC GCACACAGCG TGAAGGCACC AAGGTGCGCA AGATCCGTCT GTTCAAGGAT
CCGCACACGG CGACCAAGGC CGAAATCCTG GCGGCGATCG ACAGCAACAT CCGCCCGGAA
ACCCGTGTAT TGGGCATGTG CTGGGTGCAT TCGGGCAGCG GCGTGAAACT GCCGATCGGC
GAAATCGGCG CGCTGGTCGA CAAGCACAAC AAGGGCCGTT CGGACGACAA CCGGATCATT
TATCTGGTGG ACGGCGTGCA CGGTTTCGGC GTCGATGACC TGAGTTTCCC GGCCATGAAC
TGCGACTTCT TTATCGCCGG CACCCACAAA TGGATGTTCG GCCCACGCGG CACCGGCATC
GTCTGCAGCC GTTTCGACCA GGTCAGGTAC ATCACGCCGA TCATTCCGAC CTTCTCCGAA
GCCACCGCGT TTTCCACCAC CATGACCCCC GGCGGCTATC ACGCCTTCGA GCACCGCTGG
GCCTTGAACG AAGCGTTCAA ATTGCACCTG CAACTGGGCA AGGCCGACGT CCAGGCGCGT
ATTCACGGCT TGAACAGCTA TCTGAAAAAG CGCCTGCAGG AACATCCGCA GATCGAACTG
GTGACGCCGC TGAGCCCCGA ACTCTCCGCC GGTTTCACCT TCTTCCGGGT CAAGGGCAAG
GACTGCGACA AGATCGCCGC CTACCTGATG CAGAACAAGG TGATCGCCGA TGCCGTCGAC
CGCGACGTCG GCCCGGTCAT TCGCAGCGCG CCGGGCCTGT TGAACACCGA ACAAGAAATC
GACCGTTTCA TGACCGTGCT CGTCAGCCAG ATCTGA
|
|---|
| Protein sequence | MSDRRTFLKQ AGILAAGLPL ASGIAHGAST DNTTNVAPAA PAQDKWTQLR TLFEQDPDCL
HFSNFLITSH PRPVRDAIAL HRAALDKNPG LAMDWDLGVI EQREEEVRVW AGRYLQADAR
QIALTGSTTE GLAMIYGGAH VRADQEILTT QHEHYATHTI LALRTQREGT KVRKIRLFKD
PHTATKAEIL AAIDSNIRPE TRVLGMCWVH SGSGVKLPIG EIGALVDKHN KGRSDDNRII
YLVDGVHGFG VDDLSFPAMN CDFFIAGTHK WMFGPRGTGI VCSRFDQVRY ITPIIPTFSE
ATAFSTTMTP GGYHAFEHRW ALNEAFKLHL QLGKADVQAR IHGLNSYLKK RLQEHPQIEL
VTPLSPELSA GFTFFRVKGK DCDKIAAYLM QNKVIADAVD RDVGPVIRSA PGLLNTEQEI
DRFMTVLVSQ I
|
|---|
| |