Gene Pfl01_1835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1835 
Symbol 
ID3716388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2053595 
End bp2054281 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content62% 
IMG OID 
ProductThiJ/PfpI 
Protein accessionYP_347567 
Protein GI77458062 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTGC AGATCGGTTT TCTGTTGTTT CCCCAGGTGC AGCAACTCGA CCTGACCGGC 
CCGTATGACG TGCTGGCCTC TCTGCCGGAC GTGCAGGTGC ATCTGGTCTG GAAGGATTTG
GTGCCGGTAA CTTCCAGCAC CGGGCTGCAG CTGAAACCGA CCACTACGTT CGAGGACTGC
CCGGTTTTGG ACGTGATCTG CGTACCCGGC GGCGCCGGGG TCGGGCCGTT GATGGAGGAT
GAGCAGACGC TGGACTTCAT CAGGTCGCAA GCGGCACAGG CTCGGTACGT TACGTCGGTT
TGCACCGGTT CGCTTGTGCT TGGCGCGGCG GGTCTGTTGC AAGGTAAACG GGCGACTACG
CACTGGGCAT ATCACGATTT GCTGCCGACA CTGGGCGCGA TTCCGGTGAA GGATCGGGTG
GTGCGTGACG GCAATCTGTT TACCGGGGGC GGCATCACCG CCGGGATCGA TTTTGCCCTG
ACACTGGCGC AGGAACTGGT CGGTGTCGAT ACGGCGCAAC TGGTGCAGTT GCAGCTGGAA
TACGCGCCGG CGCCGCCATT TGATTCGGGC AGCCCGGACA CGGCGCCGAG TACTGTTGTC
GATGAGGCGC GCAAGCGTGC GGCGCCTTCA TTGAAGTTGC GCACTGAAAT CACCGAGCGT
GCTGCGGCGA AGCTCAATCT GCGCTGA
 
Protein sequence
MALQIGFLLF PQVQQLDLTG PYDVLASLPD VQVHLVWKDL VPVTSSTGLQ LKPTTTFEDC 
PVLDVICVPG GAGVGPLMED EQTLDFIRSQ AAQARYVTSV CTGSLVLGAA GLLQGKRATT
HWAYHDLLPT LGAIPVKDRV VRDGNLFTGG GITAGIDFAL TLAQELVGVD TAQLVQLQLE
YAPAPPFDSG SPDTAPSTVV DEARKRAAPS LKLRTEITER AAAKLNLR