Gene Pfl01_1820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1820 
Symbol 
ID3716426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2033982 
End bp2034965 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content62% 
IMG OID 
Productcytochrome c oxidase cbb3-type, subunit III 
Protein accessionYP_347552 
Protein GI77458047 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.700431 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACAT TCTGGAGTCT GTACGTCACA GTCCTCAGTC TCGGTACGAT CTTTTCCCTG 
ACCTGGCTGT TGCTGTCGAC CCGCAAGGGC CAGCGCAGCG AACAGACGGA CGAGACAGTG
GGCCACTCCT TCGACGGAAT CGAGGAGTAC GACAACCCGC TGCCGAAATG GTGGTTCATG
CTGTTCGTGG GTACCATCGT GTTTGCGCTG GGTTATCTGG TGCTGTACCC GGGCCTGGGC
AACTGGAAAG GCCTGCTGCC GGGCTACAAC TACCTCGATA CCGAGAAGCA GACCGCGTTC
GCCAACGGCC AGACCGGCTG GACCGGCGTT CACGAATGGG AAAAGGAAAT GGCGCGTTCG
GACGCCAAGT TCGGTCCGAT CTTCGCCAAG TTCGCCGCCA TGCCGATCGA AGAAGTCGCC
AAGGATCCGC AAGCCCTGAA GATGGGTGGC CGCCTGTTCG CCTCCAACTG CTCGGTCTGC
CACGGTTCCG ATGCCAAGGG CGCTTATGGT TTCCCTAACC TGACCGACGC CGACTGGCGC
TGGGGCGGCG AGCCGGAAAC CATCAAGACC ACCATCATGG GCGGTCGTCA CGCGGTGATG
CCGGCCTGGG CAGAAGTGAT CGGCGAGCAA GGCGTGGCCG ACGTGGCCGC GTTCGTGCTG
ACCAATCTGG ATGGCCGCAA GCTGCCGGAA GGCACCAAGG CAGACCCGGC CAACGGCCAG
AAACTGTTCG CCGCCAACTG CGTGGCCTGC CACGGTCCGG AAGGCAAAGG CACCCCGGCA
ATGGGCGCCC CGAACCTGAC CCACCCGGCC GCGTTCATCT ACGGTTCGAG CTTCGCCCAG
CTGCAGCAGA CCATCCGTTA CGGCCGTCAG GGCCAGATGC CTGCCCAGGA ACAACTGCAA
GGCAACGACA AGGTTCACCT GCTGGCGGCT TACGTTTACA GCCTGTCCCA CGGTGAAAAA
CCAGCGGAAG CCGAGGCTCA GTAA
 
Protein sequence
MTTFWSLYVT VLSLGTIFSL TWLLLSTRKG QRSEQTDETV GHSFDGIEEY DNPLPKWWFM 
LFVGTIVFAL GYLVLYPGLG NWKGLLPGYN YLDTEKQTAF ANGQTGWTGV HEWEKEMARS
DAKFGPIFAK FAAMPIEEVA KDPQALKMGG RLFASNCSVC HGSDAKGAYG FPNLTDADWR
WGGEPETIKT TIMGGRHAVM PAWAEVIGEQ GVADVAAFVL TNLDGRKLPE GTKADPANGQ
KLFAANCVAC HGPEGKGTPA MGAPNLTHPA AFIYGSSFAQ LQQTIRYGRQ GQMPAQEQLQ
GNDKVHLLAA YVYSLSHGEK PAEAEAQ