Gene Pfl01_1813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1813 
Symbol 
ID3716419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2025099 
End bp2026481 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content63% 
IMG OID 
Productcoproporphyrinogen III oxidase 
Protein accessionYP_347545 
Protein GI77458040 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGACG CCATTCGTTG GGACACCGAT TTGATCCGCC GCTACGACCT GGCGGGGCCG 
CGCTACACCT CGTACCCGAC GGCCGTGCAA TTTCACAGTC AGGTCGGCAC CTTCGACCTG
TTTCACGCCC TGCGCGACAG CCGCAAGGCC CTGCGCCCGC TGTCGCTGTA CGTGCACGTG
CCGTTCTGCG CGAACATTTG CTACTACTGC GCCTGCAACA AGGTCATCAC CAAGGATCGC
GGCCGCGCGT TGCCTTATCT GCAACGGCTC GAGCAGGAAA TCCAATTGAT CGCCTGCCAC
CTCGACCCGG CGCAGAAAGT CGAGCAACTG CACTTCGGCG GCGGCACGCC GACCTTTCTC
AGCCACGATG AATTGCGGCA GTTGATGGCG CACCTGCGCA AGCACTTCAA TCTGCTGGAC
GATGATTCTG GCGACTACGG CATCGAAATC GACCCGCGCG AAGCCGACTG GTCGACCATG
GGCCTGCTGC GGGAACTGGG CTTCAACCGG GTCAGCATCG GCCTGCAGGA TCTCGACCCG
GCGGTGCAGC GGGCGGTCAA TCGCCTGCAA AGCCTGGAAG AAACCCGCGC GGTGATCGAC
GCGGCGCGGA CCCTGCAATT TCGCTCGATC AACATCGACC TGATTTACGG CCTGCCCAAA
CAGACCCCGG ACAACTTCGC CCGCACCGTC GAGGAAGTCA TCAGCCTGCA ACCGGACCGG
CTCTCGGTGT TCAACTACGC GCACCTGCCG GAACGCTTCA TGCCGCAGCG GCGGATCAAC
GGCAACGAAC TGCCGAGCCC GGCGCAGAAA CTGGAAATGC TGCAACGCAC CATCGAACAA
CTGACCGCCG CCGGCTACCG CTACATCGGC ATGGACCACT TCGCCCTGCC CGACGATGAA
CTGGCGATTG CTCAGGAAGA GTCGACCCTG CAACGCAATT TCCAGGGCTA CACCACCCAC
GGCCATTGCG ACTTGATCGG CCTGGGCGTG TCGGCCATCA GCCAGATCGG CGACCTGTAC
TGCCAGAACA GCAGCGACCT CAATCACTAC CAGAACACCC TCGCCGGCGC GCAACTGGCC
ACCAGCCGGG GCCTGGTGTG CAACGCCGAC GATCGCCTGC GCCGCGCGGT AATTCAGCAA
CTGATCTGCA ACTTCAGCCT GGATTTCGCC GAGATCGAGC GCAGTTTCAA CATCGATTTT
CAGGGCTACT TCGGCGCGCT CTGGCCGCAA TTGCAGGGCA TGGCGCAGGA CGGGTTGATC
GAACTGGATC GCGAGCGCAT CACCGTGCTA CCGGCCGGGC GCCTGCTGGT ACGTTCGGTG
TGCATGGTGT TCGACGCGTA TCTGGAGCAG CAGAACCGCC AGCGTTTTTC GCGGGTGATC
TAG
 
Protein sequence
MLDAIRWDTD LIRRYDLAGP RYTSYPTAVQ FHSQVGTFDL FHALRDSRKA LRPLSLYVHV 
PFCANICYYC ACNKVITKDR GRALPYLQRL EQEIQLIACH LDPAQKVEQL HFGGGTPTFL
SHDELRQLMA HLRKHFNLLD DDSGDYGIEI DPREADWSTM GLLRELGFNR VSIGLQDLDP
AVQRAVNRLQ SLEETRAVID AARTLQFRSI NIDLIYGLPK QTPDNFARTV EEVISLQPDR
LSVFNYAHLP ERFMPQRRIN GNELPSPAQK LEMLQRTIEQ LTAAGYRYIG MDHFALPDDE
LAIAQEESTL QRNFQGYTTH GHCDLIGLGV SAISQIGDLY CQNSSDLNHY QNTLAGAQLA
TSRGLVCNAD DRLRRAVIQQ LICNFSLDFA EIERSFNIDF QGYFGALWPQ LQGMAQDGLI
ELDRERITVL PAGRLLVRSV CMVFDAYLEQ QNRQRFSRVI