Gene Pfl01_1786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1786 
Symbol 
ID3716584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1987618 
End bp1988637 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content64% 
IMG OID 
Productdihydroorotate dehydrogenase 2 
Protein accessionYP_347518 
Protein GI77458013 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACACCC TGGCCCGTCA GCTGTTGTTC AAACTTTCCC CGGAAACCTC CCACGATCTG 
TCGCTGGATC TGATCGGCGC GGGCGGGCGT TTGGGCCTCA ACGGTTTGCT GTGCAAGGCC
CCGGCGTCGC TGCCGGTGAA TGTCATGGGC TTGCAATTCC CAAATCCTGT GGGGCTGGCG
GCCGGTCTGG ACAAGAACGG CGCGGCCATC GACGGCTTCG CGCAACTGGG TTTCGGTTTT
GTCGAAATCG GCACCGTGAC TCCGCGCCCG CAGCCGGGCA ACCCGAAACC ACGGATTTTC
CGTCTGCCGG AAGCCGAGGC GATCATCAAT CGCATGGGGT TCAACAACCT CGGTGTGGAT
AACCTGCTGG CGCGGGTGGC GGCGGCCAAA TACAAGGGCG TGCTGGGGAT CAACATCGGC
AAGAACTTCG ACACCCCGGT CGAGCGCGCT GTAGACGACT ACCTGATCTG CCTGGACAAG
GTCTACGCCC ACGCCAGTTA CGTCACGGTC AACGTCAGCT CGCCGAACAC TCCGGGCCTG
CGCAGCCTGC AATTCGGCGA TTCGCTCAAG CAATTGCTGG CGGACCTGGC CACGCGCCGC
GCCGAACTGG CCCTGCGCCA CGGCAAGCAT GTACCGCTGG CGATCAAGAT CGCGCCGGAC
ATGACCGACG AAGAAACCGC GCAAGTCGCC CAGGCGCTGA TCGAAACCGG GATGGACGCG
GTGATCGCCA CCAACACCAC CCTCAGCCGC GTGGGCGTCG AAGGCATGGA ACATGGTGAC
GAGGCGGGCG GTCTGTCCGG CGCGCCAGTG CGTGAAAAGA GTACCCATAC CGTGAAAGTG
CTGGCGTCCG AGCTGGGCGG CAAGCTGCCG ATCATCGCGG CGGGCGGTAT CACCGAAGGC
AAGCATGCGG CTGAGAAGAT CGCTGCCGGC GCGAGCCTGG TGCAGATCTA CTCCGGCTTC
ATCTACAAGG GCCCGGCGCT GATTCGCGAG TCCGTGGACG CGATCGCCGC CAAGCGCTGA
 
Protein sequence
MYTLARQLLF KLSPETSHDL SLDLIGAGGR LGLNGLLCKA PASLPVNVMG LQFPNPVGLA 
AGLDKNGAAI DGFAQLGFGF VEIGTVTPRP QPGNPKPRIF RLPEAEAIIN RMGFNNLGVD
NLLARVAAAK YKGVLGINIG KNFDTPVERA VDDYLICLDK VYAHASYVTV NVSSPNTPGL
RSLQFGDSLK QLLADLATRR AELALRHGKH VPLAIKIAPD MTDEETAQVA QALIETGMDA
VIATNTTLSR VGVEGMEHGD EAGGLSGAPV REKSTHTVKV LASELGGKLP IIAAGGITEG
KHAAEKIAAG ASLVQIYSGF IYKGPALIRE SVDAIAAKR