Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1781 |
Symbol | |
ID | 3716579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 1979720 |
End bp | 1982191 |
Gene Length | 2472 bp |
Protein Length | 823 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | assimilatory nitrite reductase (NAD(P)H) large subunit precursor |
Protein accession | YP_347513 |
Protein GI | 77458008 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCCCGG AGAACCTGAT GAAAAAACTC AAACTGGTGA TGATCGGCAA TGGCATGGCC GGGGTTCGCA CCCTGGAAGA ACTGCTGAAA CTGAGCAACG AGCTGTACGA CATCACGGTC TTCGGCGCCG AACCGCACAC CAACTACAAC CGCATCCTGT TGTCGCCGGT ACTGGCCGGC GAACAGACCT TCGAAGAGAT CGTGCTCAAC GACCTCGACT GGTATCTGGA AAACAACATC AAACTGCTGC TCAACCGCAA AGTGGTGGAG ATCGACCGGG TCAAACGCCG AGTGATCGCC GAGGATGGCA CCGAAGCCGA ATACGATCGT CTGCTGATCG CCACAGGTTC GACCCCGTTC ATCCTGCCGA TCCCCGGCAA CACCTTGCAG GGCGTGATCG GCTACCGCGA CATCGCCGAC ACCCAGGCGA TGATCGACAC TGCCAAGACC CACAAGCACG CCGTGGTGAT CGGCGGCGGC CTGCTCGGTC TCGAAGCGGC CAACGGCCTG ATGCTGCGCG GCATGCACGT CACCGTGGTG CACCTCGGTG AATGGCTGCT GGAGCGGCAA CTGGACAAGA CCAGCGGCCA ACTTTTGCAA ACCGCCCTAG AATCCCGTGG CCTGCACTTT CGCCTGTGTG AACAGACCCA GGCCCTGCAC GACGCCGGCA ATGGTCGGGT CGGCTCGGTG CAGTTCAAGA ACGGCGACAT CATTCCTGCC GATCTGGTGG TCATGGCCGC CGGCATCCGC CCCAATACCG AACTGGCGGA AAAGGCCGGC ATCCCGTGCA ACCGCGGGAT TCTGGTCAAC GACACCCTGC AAACCTACGA CCCACGCATC TATGCGATCG GCGAATGCGC CAGCCACCGT GGCATCGCCT ACGGCCTGGT GGCGCCGCTG TTTGAACAGG CCAAGGTCTG CGCCAACCAC CTGGCGCAAC TGGGTTTCGC CCGTTATCAG GGCTCGGTGA CGTCGACCAA ACTGAAGGTT ACCGGCATCG ATCTGTTTTC CGCTGGCGAC TTCATGGGCG GCGAAGGCAC CGAGACCATT ACCCTCTCCG ACCCGATCGG TGGGGTGTAC AAAAAACTGG TGATCAAGGA TGACGTGCTG GTCGGCGCCT GTCTGTACGG CGATACGGCA GATGGCGGTT GGTATTTCCG GCAGATTCGT GAGAATCACG CCATCGGCGA GATCCGCGAT CACCTGATGT TTGGAGAAAA TGCACTTGGC GATGTAGGAC ATCAGGGCCA GGACAAAGCC ATGAGCATGG CCGACAACGC CGAAGTCTGC GGCTGCAACG GCGTGTGCAA GGGCACCATC GTCAAGGCGA TTCAGGAACA CGGCCTGTTC AGCGTCGACG AGGTGAAGAA ACACACCAAG GCCGCCAGCT CCTGCGGCTC CTGCGCCGGG CTGGTCGAGC AGATCCTGAT CAACACCGTC GGCGGTGCGG CGGACGTCAA ACCTAAAAGC GAAAAAGCCA TCTGCGGTTG CAGCGACCTC AACCACGGCC AGATTCGCCA GGCGATTCGC GAACAGCATC TGCTGACCAT CGCCGGCACC ATGAGCTACC TCAACTGGCG CACCCCGAAC GGCTGCGCCA CCTGCCGCCC GGCCCTCAAC TACTACCTGA TTTCCACCTG GCCCGGCGAG GCCAAGGACG ATCCGCAGTC GCGCCTGATC AACGAGCGGG CCCACGCCAA CATCCAGAAG GACGGCACTT ATTCGGTGGT GCCGCGGATG TGGGGCGGCG TGACCAACCC GTCGGAACTG CGTCGGATCG CCGACGTGGC GGACAAATAC CAGGTGCCAA TGGTCAAGGT CACCGGCGGC CAGCGCATCG ACTTGCTGGG GATCAAGAAA CAGGATTTGC CCGGCGTATG GAAAGACCTC GACATGCCGT CCGGCCACGC CTATGGCAAA TCGATCCGCA CGGTGAAAAC CTGCGTCGGC AGCGAGTTCT GTCGCTTCGG CACGCAGAAC TCGACCCAGT TGGGCATCGA CCTCGAACAC GACCTGTTCA ACATGTGGTC GCCGCACAAA GTGAAACTGG CAGTCTCCGG ATGCCCACGC AACTGCTCGG AAGCAGGGAT CAAGGACGTA GGCATCATCG GCGTCGACTC CGGCTGGGAG ATGTATATCG GTGGCAATGG CGGGATCAAG ACCGAAGTCG CCGAGTTCTT CGTCAAGCTC AAGACCGCCG AGGAAGTGCG CGAGTACAAC GGCGCGTTCC TGCAGCTGTA CCGCGAAGAA GCCTTCTACC TCGAACGCAC CGTGCACTAC CTGCAACGGG TCGGCATGGA GCACATCAAG AAAGCCGTGC TGGAAGATCC CGAGCGTCGC AAGGCCCTGA ACGAGCGCCT GCAATTCTCC CTGTCGTTCG AACAGGACCC GTGGAAAGAG CGCCTTGCCC AGCCGCAACT GAAGAAAGAA TTCGACGTGC TCCCTGTGAA AAACCTGGAG GTGCCAGCAT GA
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Protein sequence | MLPENLMKKL KLVMIGNGMA GVRTLEELLK LSNELYDITV FGAEPHTNYN RILLSPVLAG EQTFEEIVLN DLDWYLENNI KLLLNRKVVE IDRVKRRVIA EDGTEAEYDR LLIATGSTPF ILPIPGNTLQ GVIGYRDIAD TQAMIDTAKT HKHAVVIGGG LLGLEAANGL MLRGMHVTVV HLGEWLLERQ LDKTSGQLLQ TALESRGLHF RLCEQTQALH DAGNGRVGSV QFKNGDIIPA DLVVMAAGIR PNTELAEKAG IPCNRGILVN DTLQTYDPRI YAIGECASHR GIAYGLVAPL FEQAKVCANH LAQLGFARYQ GSVTSTKLKV TGIDLFSAGD FMGGEGTETI TLSDPIGGVY KKLVIKDDVL VGACLYGDTA DGGWYFRQIR ENHAIGEIRD HLMFGENALG DVGHQGQDKA MSMADNAEVC GCNGVCKGTI VKAIQEHGLF SVDEVKKHTK AASSCGSCAG LVEQILINTV GGAADVKPKS EKAICGCSDL NHGQIRQAIR EQHLLTIAGT MSYLNWRTPN GCATCRPALN YYLISTWPGE AKDDPQSRLI NERAHANIQK DGTYSVVPRM WGGVTNPSEL RRIADVADKY QVPMVKVTGG QRIDLLGIKK QDLPGVWKDL DMPSGHAYGK SIRTVKTCVG SEFCRFGTQN STQLGIDLEH DLFNMWSPHK VKLAVSGCPR NCSEAGIKDV GIIGVDSGWE MYIGGNGGIK TEVAEFFVKL KTAEEVREYN GAFLQLYREE AFYLERTVHY LQRVGMEHIK KAVLEDPERR KALNERLQFS LSFEQDPWKE RLAQPQLKKE FDVLPVKNLE VPA
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