Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1763 |
Symbol | |
ID | 3716600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1958415 |
End bp | 1959140 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | GntR family transcriptional regulator |
Protein accession | YP_347495 |
Protein GI | 77457990 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.481898 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGATC AACTCGATCC CCCGGTGATC AGCGGTGACG ATTCCGAGAC GCTCTCGGAA AACGTCTTCC GGCGCATTCA GGCGGCCATC GTCAAAGGTG AGATCGCCCC GGGCAGCAAG ATCTCCGAGC CGGAACTGGC GCGCACCTAC GGCATCAGCC GCGGGCCGCT GCGCGAGGCG ATCCATCGAC TGGAAGGCCA GCGCCTGCTG GTGCGCGTAC CGCATGTCGG TGCGCGGGTG GTGTCGCTGA GCCACGCCGA ATTGCTCGAA CTCTACGAAA TCCGTGAATC CCTCGAAGGC ATGGCCTGCC GTCTGGCGGC CGAGCGCATG ACCGTCGAAG AAATCGACGA ACTGCGCCGG GTGCTGGAAA CCCATGAGCG CGATGCGGCG TTTCAGGCTG GCGTCGGCTA CTACCAGCAG GAAGGCGATT TCGACTTTCA CTACCGGATC ATCCAGGGCA GCGGCAACCG CACCCTCACG CAAATGCTCT GCGGCGAGCT CTATCAACTG GTGCGCATGT ACCGCATCCA GTTTTCCACC ACGCCCAACC GCCCGCGCCA GGCCTTTGCC GAACACCACC GGATTCTTGA TGCCATCGCC GACCGTGACG GCGAGCTGGC GGAATTGTTG ATGCGCCGTC ACATCGGCGC CTCGAAACGC AACATCGCCC GTCACTACCA GGACGGCGCC GACAACAAGA CAGCCACTGA ACGAGGTGAG TCATGA
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Protein sequence | MLDQLDPPVI SGDDSETLSE NVFRRIQAAI VKGEIAPGSK ISEPELARTY GISRGPLREA IHRLEGQRLL VRVPHVGARV VSLSHAELLE LYEIRESLEG MACRLAAERM TVEEIDELRR VLETHERDAA FQAGVGYYQQ EGDFDFHYRI IQGSGNRTLT QMLCGELYQL VRMYRIQFST TPNRPRQAFA EHHRILDAIA DRDGELAELL MRRHIGASKR NIARHYQDGA DNKTATERGE S
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