Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1752 |
Symbol | |
ID | 3716647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1946572 |
End bp | 1947270 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | HAD family hydrolase |
Protein accession | YP_347484 |
Protein GI | 77457979 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAATG CACCGCTGAA GGCGTTCGGC CCGATCAAGG CCGTGATTTT CGACATGGAC GGTTTGCTGC TGGACACCGA GGGCATCTAC ACCGAGGTTA CCTCGCTGAT TGCCGAGCGT TACGGGCGCA CGTTCGATTG GAGCATCAAA CAGAACATCA TCGGGCGCGG CGCCGGCGAT CTCGCGCGTT ATGTGGTTGA AGCGCTGGAC CTGCCGATCA CCGCCGAAGA GTTTCTGGTG ATCCGCGAGC CGCTGATGCG TGAGCGTTTT CCCACCGCGC AAGCGATGCC GGGCGCCGAG GAACTGATCC GCCACCTCAA GGCGCACAAC ATTCCGATTG CGGTCGGCAC CAGTTCGTCG CGTCAGTCGT TCGGTCAGAA AACCACCTTG CACCGCGACT GGTTTGCGTT GTTCGACTTC ATCGTCACCG CTGACGACCC GGAAGTCGGT GCGGCCAAAC CGGCGCCGGA CATCTTCCTC ACCGCCGCTC GCCGCCTCGG TGTTGCGCCG GAAGATTGCC TGGTGTTTGA AGATTCGCCG TTCGGTGTGA CAGCCGCGAA AGCAGCCGGC ATGACTGCCA TCGCCATTCC CGATGCCGCC ATGGCCGATG AAAAATACGC ACACGCCGAC GGGATTCTTC GTACGTTGAA AGCGTTCACG CCGAGTGCTT GCGGGTTGCC GGCGCTCGAC TGGGCTTGA
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Protein sequence | MMNAPLKAFG PIKAVIFDMD GLLLDTEGIY TEVTSLIAER YGRTFDWSIK QNIIGRGAGD LARYVVEALD LPITAEEFLV IREPLMRERF PTAQAMPGAE ELIRHLKAHN IPIAVGTSSS RQSFGQKTTL HRDWFALFDF IVTADDPEVG AAKPAPDIFL TAARRLGVAP EDCLVFEDSP FGVTAAKAAG MTAIAIPDAA MADEKYAHAD GILRTLKAFT PSACGLPALD WA
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