Gene Pfl01_1742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1742 
Symbol 
ID3716636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1935132 
End bp1936103 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content60% 
IMG OID 
ProductMg2+ transporter protein, CorA-like 
Protein accessionYP_347474 
Protein GI77457969 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCGAG TTGTTGCTGC TGCGGTTTAC AGCGCCGGTA AGAAAGTCAC CAATATTTCC 
CTCGACGAAG GCGCGGCCTG GGCCGCCAAG ACCGGCCACT TCGTCTGGAT CGGCCTCGAA
GAGCCGAACG CCCAGGAACT CTCCAACCTG CAACGCCAGT TCAACCTGCA CGAACTGGCC
ATCGAAGACG CCCTGGAAAA ACACAGCCGG CCGAAGCTCG AAACCTTCGG TGATGCGCTG
TTCATCGTCA CCTACTCGCC GGTGCGCGAA CACGGGATTC TGCAGTTCAT CGAAACCCAT
ATCTTCGCCG GCAAGGGCTA CATCATCACC GCCCGCAACG GTCACTCGGC GTCCTACGCC
CACGTCCGCC AGCGCTGTGA GGCGCGGCCA TTGTTGCTGG AGCACGGGGA AGATTTCGTA
CTGTATGCGC TGCTGGATTT CGTGATCGAA AACTATCAGC CGGTGGGCGA AGCGATCCAT
GCCGAGATTG ATGAGCTGGA ACGCAACGTA TTGTGCAGCG CGCTGAATGA GCACGATATC
CAGAAGCTGC ACGGCCTGCG TCGCGACGTC CTGCGCCTGC GCCGTTACGC CGCGCCGATG
GTGGAAATCG GCGAGGAACT GCAGAAGCTG AGCTTCCCCT TCATCGACAA GAACATGCGA
CCGTACTTCC GTGATGTGCA GATCCACGTG AACCGGCAGA TGGAAGACCT GACCACCCTG
GCCGACATCG CCAGCCAGAC CATCGAAATC GGCGTGTTGC TGGAGGCGTC ACGGCAGAGC
GTGGTGCAGC GCAAATTCGC TGCCTGGGCG GCGATTCTGG CATTCCCGAC GGCGGTGGCG
GGGATCTACG GGATGAACTT CCAGAACATG CCGGAGCTGA GCTGGCACTA CGGCTATTTC
GGTGTATTGG GCTTTATCAC GGTCGGCTGC GTGAGCCTGT GGGCGAGCTT CAAGAAATCG
GGCTGGCTAT AA
 
Protein sequence
MGRVVAAAVY SAGKKVTNIS LDEGAAWAAK TGHFVWIGLE EPNAQELSNL QRQFNLHELA 
IEDALEKHSR PKLETFGDAL FIVTYSPVRE HGILQFIETH IFAGKGYIIT ARNGHSASYA
HVRQRCEARP LLLEHGEDFV LYALLDFVIE NYQPVGEAIH AEIDELERNV LCSALNEHDI
QKLHGLRRDV LRLRRYAAPM VEIGEELQKL SFPFIDKNMR PYFRDVQIHV NRQMEDLTTL
ADIASQTIEI GVLLEASRQS VVQRKFAAWA AILAFPTAVA GIYGMNFQNM PELSWHYGYF
GVLGFITVGC VSLWASFKKS GWL