Gene Pfl01_1728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1728 
Symbol 
ID3716679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1920531 
End bp1922369 
Gene Length1839 bp 
Protein Length612 aa 
Translation table11 
GC content62% 
IMG OID 
Productlong-chain-acyl-CoA synthetase 
Protein accessionYP_347460 
Protein GI77457955 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCACG CGCCGAGCGA CACGATTACC TGGGGCATGA TGCTCCGCAA ACTGCCGATG 
ATTGCCAAAG CCATCCCGCG GGTGGTGAAA GGCATGAAGG TGGCCAACGT CAAGGATCCG
ACCCAAACCT GTGGCCTGGG CTGGACATTC GAGCAAGCGA CCCTGCGCAA TCCCGAAGGC
CCCGCGCTGC TGTCGGGCGA GGTGGTGCTG AGTTATTCAC AGGTCAACCA GTGGGCCAAC
CGCATTGCCC ACTATTTGAT CGGCCAGGGT ATCGGCAAGG GCGATGTGGT GGCGGTGTTC
ATCGAGAACC GCCCGGAACT GCTGGTGACG ATTCTGGCCC TGGCCAAGGT CGGCGCCGTC
AGCGCGCTGC TCAATACCTC GCAGACCCGC GATACGCTGA TCCACAGCAT CAATCTGGTG
ACGCCGGCGG CGATTGTCGT CGGTGAGGAA CTGCTGCCGG CATTTGCGGC GGTACGCGAG
CAAGTGTCGA TCCCGGCAAC GCGCGCCTGG TTCGTCGCCG ATCAGGATAC CTTCAGCCAT
CCGGGCATCG CGCCCGAGGG CTACATCAAC CTGATCAGCG CCAGTGCCGA CGCCTCGGGC
GACAACCCGG CCAGCAGCCG GCAGATTTTC TTCGACGACC CCTGTTTCTA CATCTACACC
TCCGGCACCA CCGGTTTGCC CAAGGCCGGC GTGTTCAAGC ACGGCCGCTG GATGCGCAGT
TCGGCGAGCT TCGGCATGAT CGCCCTCGAC ATGCGCCCGG ACGACATCGT CTATTGCACC
TTGCCGCTGT ACCACGCCAC CGGGCTTTGC GTGTGTTGGG GTTCGGCGGT TAATGGCGCT
TCGGGTTTCG CGATTCGCCG CAAGTTCAGC GCCCGCCAGT TCTGGAGCGA CGTGCGCCGC
TACCGCGCAA CCACCATCGG TTACGTCGGC GAGTTGTGCC GTTATCTGGT GGATCAGCCG
CTCAGCGCCG ACGACAGCCG TCACGACGTG CGCAAAATGA TCGGCAACGG CCTGCGGCCC
GGCGCGTGGG CCGAGTTCAA GACCCGTTTC GGCGTGGATC ACATTTGCGA GCTGTACGCG
GCCAGCGACG GCAATATTGG CTTCACCAAC ATCCTCAATT TCGACAACAC CATCGGCTTC
TCGCTGATGG CCTGGGAACT GGTCGCCTAC GACCAGGACA GCGGCGAGCC GATTCGTGGC
GCTGACGGGT TCATGCGCAA GGTCGGTCGG GGCGAGCGAG GCCTGCTGCT GGCGCGGATC
GACGACAAGG CGCCGCTGGA CGGCTACACC GATCCGCAGA AAACCGCCAA AGTCGTGCTG
CAGGACGTGT TCATCAAAGG GGATCGCTTT TTCAATACCG GCGATCTGCT GCGCAACATC
GGTTTTGGTC ATGCACAGTT TGTCGACCGC CTCGGCGACA CCTACCGCTG GAAGGGAGAG
AACGTCTCGA CCACCGAGGT CGAGAACCTG CTGCTCCAAC ATCCGCACAT TTCCGAAGCC
GTGGCCTATG GTGTGGAAAT CCCCAACACC AACGGTCGCG CCGGGATGGC GGCGATCACC
CCGGCCGAGT CTTTGGCGAC CCTGGATTTC GCCGAACTGT TGGCCTTCGT CCGCCAGCGT
ATGCCGGCCT ACGCGGTGCC GTTGTTCTTA CGGGTCAAGG TGAAAATGGA AACCACCGGC
ACCTTCAAAT ACCAGAAGAC GCGCCTGAAA AACGAAGGCT TCGATCCCCG CCAGACAGGC
GATGACCCGA TTTATGCCTG GCTGCCAGGG ACAGAAACCT ACGTGCAGGT CTCGGATGGA
ATCCTTGCGG ACATCCGGGC AGGCAAGTTC CGTTATTGA
 
Protein sequence
MRHAPSDTIT WGMMLRKLPM IAKAIPRVVK GMKVANVKDP TQTCGLGWTF EQATLRNPEG 
PALLSGEVVL SYSQVNQWAN RIAHYLIGQG IGKGDVVAVF IENRPELLVT ILALAKVGAV
SALLNTSQTR DTLIHSINLV TPAAIVVGEE LLPAFAAVRE QVSIPATRAW FVADQDTFSH
PGIAPEGYIN LISASADASG DNPASSRQIF FDDPCFYIYT SGTTGLPKAG VFKHGRWMRS
SASFGMIALD MRPDDIVYCT LPLYHATGLC VCWGSAVNGA SGFAIRRKFS ARQFWSDVRR
YRATTIGYVG ELCRYLVDQP LSADDSRHDV RKMIGNGLRP GAWAEFKTRF GVDHICELYA
ASDGNIGFTN ILNFDNTIGF SLMAWELVAY DQDSGEPIRG ADGFMRKVGR GERGLLLARI
DDKAPLDGYT DPQKTAKVVL QDVFIKGDRF FNTGDLLRNI GFGHAQFVDR LGDTYRWKGE
NVSTTEVENL LLQHPHISEA VAYGVEIPNT NGRAGMAAIT PAESLATLDF AELLAFVRQR
MPAYAVPLFL RVKVKMETTG TFKYQKTRLK NEGFDPRQTG DDPIYAWLPG TETYVQVSDG
ILADIRAGKF RY