Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1728 |
Symbol | |
ID | 3716679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1920531 |
End bp | 1922369 |
Gene Length | 1839 bp |
Protein Length | 612 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | long-chain-acyl-CoA synthetase |
Protein accession | YP_347460 |
Protein GI | 77457955 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCACG CGCCGAGCGA CACGATTACC TGGGGCATGA TGCTCCGCAA ACTGCCGATG ATTGCCAAAG CCATCCCGCG GGTGGTGAAA GGCATGAAGG TGGCCAACGT CAAGGATCCG ACCCAAACCT GTGGCCTGGG CTGGACATTC GAGCAAGCGA CCCTGCGCAA TCCCGAAGGC CCCGCGCTGC TGTCGGGCGA GGTGGTGCTG AGTTATTCAC AGGTCAACCA GTGGGCCAAC CGCATTGCCC ACTATTTGAT CGGCCAGGGT ATCGGCAAGG GCGATGTGGT GGCGGTGTTC ATCGAGAACC GCCCGGAACT GCTGGTGACG ATTCTGGCCC TGGCCAAGGT CGGCGCCGTC AGCGCGCTGC TCAATACCTC GCAGACCCGC GATACGCTGA TCCACAGCAT CAATCTGGTG ACGCCGGCGG CGATTGTCGT CGGTGAGGAA CTGCTGCCGG CATTTGCGGC GGTACGCGAG CAAGTGTCGA TCCCGGCAAC GCGCGCCTGG TTCGTCGCCG ATCAGGATAC CTTCAGCCAT CCGGGCATCG CGCCCGAGGG CTACATCAAC CTGATCAGCG CCAGTGCCGA CGCCTCGGGC GACAACCCGG CCAGCAGCCG GCAGATTTTC TTCGACGACC CCTGTTTCTA CATCTACACC TCCGGCACCA CCGGTTTGCC CAAGGCCGGC GTGTTCAAGC ACGGCCGCTG GATGCGCAGT TCGGCGAGCT TCGGCATGAT CGCCCTCGAC ATGCGCCCGG ACGACATCGT CTATTGCACC TTGCCGCTGT ACCACGCCAC CGGGCTTTGC GTGTGTTGGG GTTCGGCGGT TAATGGCGCT TCGGGTTTCG CGATTCGCCG CAAGTTCAGC GCCCGCCAGT TCTGGAGCGA CGTGCGCCGC TACCGCGCAA CCACCATCGG TTACGTCGGC GAGTTGTGCC GTTATCTGGT GGATCAGCCG CTCAGCGCCG ACGACAGCCG TCACGACGTG CGCAAAATGA TCGGCAACGG CCTGCGGCCC GGCGCGTGGG CCGAGTTCAA GACCCGTTTC GGCGTGGATC ACATTTGCGA GCTGTACGCG GCCAGCGACG GCAATATTGG CTTCACCAAC ATCCTCAATT TCGACAACAC CATCGGCTTC TCGCTGATGG CCTGGGAACT GGTCGCCTAC GACCAGGACA GCGGCGAGCC GATTCGTGGC GCTGACGGGT TCATGCGCAA GGTCGGTCGG GGCGAGCGAG GCCTGCTGCT GGCGCGGATC GACGACAAGG CGCCGCTGGA CGGCTACACC GATCCGCAGA AAACCGCCAA AGTCGTGCTG CAGGACGTGT TCATCAAAGG GGATCGCTTT TTCAATACCG GCGATCTGCT GCGCAACATC GGTTTTGGTC ATGCACAGTT TGTCGACCGC CTCGGCGACA CCTACCGCTG GAAGGGAGAG AACGTCTCGA CCACCGAGGT CGAGAACCTG CTGCTCCAAC ATCCGCACAT TTCCGAAGCC GTGGCCTATG GTGTGGAAAT CCCCAACACC AACGGTCGCG CCGGGATGGC GGCGATCACC CCGGCCGAGT CTTTGGCGAC CCTGGATTTC GCCGAACTGT TGGCCTTCGT CCGCCAGCGT ATGCCGGCCT ACGCGGTGCC GTTGTTCTTA CGGGTCAAGG TGAAAATGGA AACCACCGGC ACCTTCAAAT ACCAGAAGAC GCGCCTGAAA AACGAAGGCT TCGATCCCCG CCAGACAGGC GATGACCCGA TTTATGCCTG GCTGCCAGGG ACAGAAACCT ACGTGCAGGT CTCGGATGGA ATCCTTGCGG ACATCCGGGC AGGCAAGTTC CGTTATTGA
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Protein sequence | MRHAPSDTIT WGMMLRKLPM IAKAIPRVVK GMKVANVKDP TQTCGLGWTF EQATLRNPEG PALLSGEVVL SYSQVNQWAN RIAHYLIGQG IGKGDVVAVF IENRPELLVT ILALAKVGAV SALLNTSQTR DTLIHSINLV TPAAIVVGEE LLPAFAAVRE QVSIPATRAW FVADQDTFSH PGIAPEGYIN LISASADASG DNPASSRQIF FDDPCFYIYT SGTTGLPKAG VFKHGRWMRS SASFGMIALD MRPDDIVYCT LPLYHATGLC VCWGSAVNGA SGFAIRRKFS ARQFWSDVRR YRATTIGYVG ELCRYLVDQP LSADDSRHDV RKMIGNGLRP GAWAEFKTRF GVDHICELYA ASDGNIGFTN ILNFDNTIGF SLMAWELVAY DQDSGEPIRG ADGFMRKVGR GERGLLLARI DDKAPLDGYT DPQKTAKVVL QDVFIKGDRF FNTGDLLRNI GFGHAQFVDR LGDTYRWKGE NVSTTEVENL LLQHPHISEA VAYGVEIPNT NGRAGMAAIT PAESLATLDF AELLAFVRQR MPAYAVPLFL RVKVKMETTG TFKYQKTRLK NEGFDPRQTG DDPIYAWLPG TETYVQVSDG ILADIRAGKF RY
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