Gene Pfl01_1726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1726 
Symbol 
ID3716677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1919103 
End bp1919786 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content60% 
IMG OID 
Product2,3-diketo-5-methylthio-1-phosphopentane phosphatase 
Protein accessionYP_347458 
Protein GI77457953 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATCA AGGTCATTCT CACCGACATC GAAGGCACCA CCAGCGCGGT GAGTTTTGTG 
TTCGACGTGC TGTTCCCATA TGCCGCCAAA CACCTGCCGG ACTTCGTCCG TCAGAACGCC
CAGCGCGCCG ACGTTGCCGA GCAACTGGAT GCCGTGCGCC GCGACAGCAA CGAACCGCAG
GCTGACGTCG AGCGAGTCGT GGAAATTCTG CTGGCCTGGA TCGCCGAAGA CCGCAAAGCC
ACGCCGCTGA AAGCGTTGCA AGGCATGGTC TGGGAGCAGG GTTATCAGGC CGGGCAGTTG
AAAGGCCATG TTTACCCGGA CGCTGTTGAA GCGCTCCAGC GCTGGCATCA GGCCGGTTAT
CAACTTTTTG TTTATTCGTC CGGTTCGATC CAGGCGCAGA AGCTGATTTT CGGCTGCTCG
GAAGCAGGAG ATCTGACGCC GTTGTTCAGT GGCTACTTCG ACACCACGTC GGGCCCCAAG
CGCGAGCCGC AGTCATATAC CAATATCCAG CAGGCCATCG GAGTCGAACC GCAGGAAATC
CTGTTCCTCT CCGACATCGT CCAGGAACTC GACGCCGCCC AGTCAGCCGG CCTGCAAACC
TGCGGCCTGG CTCGTGAGGG CGGGGAGCTG GAAGGTCATG TGACCGTCGA CAGCTTCACT
GGGATCGAAC CCGAAGCGTT CTGA
 
Protein sequence
MSIKVILTDI EGTTSAVSFV FDVLFPYAAK HLPDFVRQNA QRADVAEQLD AVRRDSNEPQ 
ADVERVVEIL LAWIAEDRKA TPLKALQGMV WEQGYQAGQL KGHVYPDAVE ALQRWHQAGY
QLFVYSSGSI QAQKLIFGCS EAGDLTPLFS GYFDTTSGPK REPQSYTNIQ QAIGVEPQEI
LFLSDIVQEL DAAQSAGLQT CGLAREGGEL EGHVTVDSFT GIEPEAF