Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1726 |
Symbol | |
ID | 3716677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1919103 |
End bp | 1919786 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | 2,3-diketo-5-methylthio-1-phosphopentane phosphatase |
Protein accession | YP_347458 |
Protein GI | 77457953 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGATCA AGGTCATTCT CACCGACATC GAAGGCACCA CCAGCGCGGT GAGTTTTGTG TTCGACGTGC TGTTCCCATA TGCCGCCAAA CACCTGCCGG ACTTCGTCCG TCAGAACGCC CAGCGCGCCG ACGTTGCCGA GCAACTGGAT GCCGTGCGCC GCGACAGCAA CGAACCGCAG GCTGACGTCG AGCGAGTCGT GGAAATTCTG CTGGCCTGGA TCGCCGAAGA CCGCAAAGCC ACGCCGCTGA AAGCGTTGCA AGGCATGGTC TGGGAGCAGG GTTATCAGGC CGGGCAGTTG AAAGGCCATG TTTACCCGGA CGCTGTTGAA GCGCTCCAGC GCTGGCATCA GGCCGGTTAT CAACTTTTTG TTTATTCGTC CGGTTCGATC CAGGCGCAGA AGCTGATTTT CGGCTGCTCG GAAGCAGGAG ATCTGACGCC GTTGTTCAGT GGCTACTTCG ACACCACGTC GGGCCCCAAG CGCGAGCCGC AGTCATATAC CAATATCCAG CAGGCCATCG GAGTCGAACC GCAGGAAATC CTGTTCCTCT CCGACATCGT CCAGGAACTC GACGCCGCCC AGTCAGCCGG CCTGCAAACC TGCGGCCTGG CTCGTGAGGG CGGGGAGCTG GAAGGTCATG TGACCGTCGA CAGCTTCACT GGGATCGAAC CCGAAGCGTT CTGA
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Protein sequence | MSIKVILTDI EGTTSAVSFV FDVLFPYAAK HLPDFVRQNA QRADVAEQLD AVRRDSNEPQ ADVERVVEIL LAWIAEDRKA TPLKALQGMV WEQGYQAGQL KGHVYPDAVE ALQRWHQAGY QLFVYSSGSI QAQKLIFGCS EAGDLTPLFS GYFDTTSGPK REPQSYTNIQ QAIGVEPQEI LFLSDIVQEL DAAQSAGLQT CGLAREGGEL EGHVTVDSFT GIEPEAF
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