| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1679 |
|---|
| Symbol | |
|---|
| ID | 3716650 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 1874618 |
|---|
| End bp | 1876735 |
|---|
| Gene Length | 2118 bp |
|---|
| Protein Length | 705 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | |
|---|
| Product | C-terminal processing peptidase-1 |
|---|
| Protein accession | YP_347411 |
|---|
| Protein GI | 77457906 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.054588 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTATC AATTGTCCCC GCGTCGAATC AGCATGAAGC ATCTGCTCCC CAGCACCGCC
CTCGCTCTTT TCATCGGTAT CGGTCTGTTG CCGGTGTCGG GCACCACATT CGCAGCCAAC
AGCTGGGACA AGTTACAGCC TGATCGCGAC GAAGTGATCG CCAGTCTGAA CGTCGTCGAG
TTGCTCAAGC GTCACCACTA CAGCAAGCCG CCGCTCGACG ATGCGCGCTC GGTGATCATC
TACGACAGCT ACATCAAGCT GCTCGACCCG TCGCGCAGCT ATTTCATGGC CAGCGACATC
GCCGAATTCG ACAAGTGGAA GACCCAGTTC GACGACTTCC TCAAGAGCGG CGACCTCAAC
GCCGGGTTCA CCATCTACAA GCGCTATCTG GATCGCGTGA AGGCGCGTCT GGACTTCGCC
CTTGCCGAGC TGAACAAAGG CGTCGACAAG ATGGACTTCA CCACCAAGGA AACCTTGCTG
ATCGATCGCA AGGACGCTCC GTGGCTCAAG TCCACCGCCG AACTCGATGA CCTGTGGCGC
AAACGCGTCA AGGACGAAGT GCTGCGGCAG AAGATCGCCG GCAAAGAGCC GAAGCAGATC
CAGGAAACCC TGACCAAACG CTACAAGAAT CAACTGGCGC GTCTGGACCA GACCCGCGCC
GAAGACATCT TCCAGGCGTA CATCAACACC TTCGCCATGT CTTACGATCC GCACACCAAC
TATCTGTCGC CGGATAACGC GGAGAACTTC GACATCAACA TGAGCCTGTC CCTCGAGGGC
ATCGGCGCCG TGTTGCAGAG CGACAACGAT CAGGTGAAAG TCGTGCGTCT GGTGCCGGCA
GGCCCGGCCG ACAAGACCAA GCAGGTTGCT CCGGCCGACA AGATCATCGG CGTTGCCCAG
GGCAACAAAG AGATGGTCGA CGTGGTCGGC TGGCGTCTGG ACGAAGTGGT CAAGCTGATC
CGTGGCCCGA AAGGCACCGT GGTGCGTCTG GAAGTCATCC CGGCCAGCAA TGCGCCGAAC
GATCAGACCA GCAAGATCGT GCCGATTACC CGCGAAGCGG TGAAGCTCGA AGACCAGGCC
GTGAAGAAAT CCGTGCTGAA CCTGAAACAG GACGGCAAGG ACTACAAGCT CGGCGTGATC
GAGATTCCGG CGTTTTACCT CGACTTCAAG GCCTTCCGTG CTGGCGATCC GGACTACAAG
AGCACCACTC GCGACGTCAA GAAACTGCTG ACCGAGCTGC AGAAAGAGAA AGTCGACGGC
GTGGTCATCG ACCTGCGCAA CAACGGCGGC GGTTCCCTGC AGGAAGCCAC CGAGCTGACC
AGCCTGTTCA TCGACAAGGG CCCAACCGTG CTCGTGCGTA ACGCCGATGG CCGGGTCGAT
GTACTTGAAG ATGAAAACCC GGGCGCGTTC TACAAAGGCC CGATGGCGCT GCTGGTCAAC
CGCCTGTCCG CCTCGGCTTC GGAGATCTTC GCCGGCGCCA TGCAGGACTA CCACCGTGCG
CTGATCATCG GTGGCCAGAC CTTCGGCAAA GGCACCGTGC AGACCATTCA GCCGCTGAAC
CATGGCGAAC TGAAACTGAC TCTGGCCAAG TTCTACCGGG TTTCCGGTCA GAGCACCCAG
CATCAGGGCG TACTGCCGGA CATCGATTAC CCGTCGATCA TCGACACCAA GGAAATCGGC
GAAAGCGCCC TGCCGGAAGC CATGCCGTGG GACACCATCC GTGCGGCGAT CAAACCGGCG
AGCGATCCGT TCAAGCCGTA CCTGGCCCAG CTGAAATCCG AGCATGACAC CCGTTCCGCC
AAGGACGCGG AGTTCGTGTT CATCCGCGAC AAGCTGGCCC TGGCGCAGAA GCTGCTGGAA
GAGAAAACCG TCAGCCTCAA TGAAGCCGAA CGCCGTGCCC AGCACGCCGA CATCGACGCC
AAGCAACTGG CGATGGAGAA CATCCGTCGC AAGGCCAAAG GCGAAGAACC GCTCAAAGAG
CTGAAAAAAG AAGACGACGA CGCCCTGGCA GCCGCCGAGC CGGACAAGGT CAAACCGGAA
GACGACGCCT ACCTGAGCGA GACCGGGCGC GTACTGCTGG ATTACCTGAA GCTGAGCAAT
CAGGTCGCAA AGAAGTAA
|
|---|
| Protein sequence | MRYQLSPRRI SMKHLLPSTA LALFIGIGLL PVSGTTFAAN SWDKLQPDRD EVIASLNVVE
LLKRHHYSKP PLDDARSVII YDSYIKLLDP SRSYFMASDI AEFDKWKTQF DDFLKSGDLN
AGFTIYKRYL DRVKARLDFA LAELNKGVDK MDFTTKETLL IDRKDAPWLK STAELDDLWR
KRVKDEVLRQ KIAGKEPKQI QETLTKRYKN QLARLDQTRA EDIFQAYINT FAMSYDPHTN
YLSPDNAENF DINMSLSLEG IGAVLQSDND QVKVVRLVPA GPADKTKQVA PADKIIGVAQ
GNKEMVDVVG WRLDEVVKLI RGPKGTVVRL EVIPASNAPN DQTSKIVPIT REAVKLEDQA
VKKSVLNLKQ DGKDYKLGVI EIPAFYLDFK AFRAGDPDYK STTRDVKKLL TELQKEKVDG
VVIDLRNNGG GSLQEATELT SLFIDKGPTV LVRNADGRVD VLEDENPGAF YKGPMALLVN
RLSASASEIF AGAMQDYHRA LIIGGQTFGK GTVQTIQPLN HGELKLTLAK FYRVSGQSTQ
HQGVLPDIDY PSIIDTKEIG ESALPEAMPW DTIRAAIKPA SDPFKPYLAQ LKSEHDTRSA
KDAEFVFIRD KLALAQKLLE EKTVSLNEAE RRAQHADIDA KQLAMENIRR KAKGEEPLKE
LKKEDDDALA AAEPDKVKPE DDAYLSETGR VLLDYLKLSN QVAKK
|
|---|
| |