Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1665 |
Symbol | |
ID | 3716799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1856146 |
End bp | 1858020 |
Gene Length | 1875 bp |
Protein Length | 624 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | phospholipid/glycerol acyltransferase |
Protein accession | YP_347397 |
Protein GI | 77457892 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.054165 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0273745 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCACC CCTCACAGTT CAACCTGCTG CGTACCCGGC GCTTCCTGCC GTTTTTCATC ACCCAGTCGC TGGGCGCGTT CAACGATAAC GTGTTCAAGC AGTCGCTGAT CCTCGCCATT CTCTATCGGC TGACCATCGA GGGTGACCGC TCGATCTGGG TCAACCTGTG TGCGCTGCTG TTTATTCTGC CGTTCTTTCT GTTCTCGGCG CTGGCCGGGC AGTTCGGGGA AAAATTCGCC AAGGACGCGT TGATCCGTCT GATCAAACTG GCAGAAATCG CCATCATGGC CGTGGGATCC GTCGGCTTCC TGTTCGATCA CCTGTCATTG ATGCTGGTGG CGCTGTTCGC CATGGGCACG CACTCGGCGC TGTTCGGGCC GGTGAAATAT TCGATCCTGC CACAGGCCTT GCGCGACGAC GAACTGGTCG GCGGCAACGG GCTGGTGGAG ATGGGCACGT TTCTGGCCAT TCTGGCCGGG ACCATTGGGG CCGGGGTGAT GATGTCGTCG GCCAATTACG CGCCGGTGGT GTCCGCCGCG ATTGTCGGCA TCGCGGTGCT GGGTTATCTG GCCAGTCGCA GCATCCCGCG CGCAGCAGCG GCGACCCCGG AAATGCGCCT GAACTGGAAC ATCTTCAGTC AGTCCTGGGC GACCCTGAAA CTGGGCTTGG GACAGACGCC TGCGGTGTCG CGTTCGATCG TCGGCAACTC GTGGTTCTGG TTCGTCGGGG CGATTTATCT GACGCAGATC CCGGCTTATG CCAAGGAGTG GATGCACGGC GACGAAACCG TCGTTACCCT GATTCTGACG GTGTTTTCGG TCGGTATCGC ACTGGGCTCG ATGCTGTGCG AGAAGCTGTC CGGGCGCAAA GTCGAGATCG GCCTGGTGCC GTTTGGCTCG TTCGGGCTGA CGGTTTTCGG TTTATTGCTG TGGTGGCATT CCGGTGGAAT CCCGGAAAGC GCCGTCGGCC ACAGCTGGAC CGAAGTGCTC GGTTTTGGCC ATGCGTGGGC GGTGTTGATC GATGTGTTGG GCCTCGGAAT TTTCGGCGGT TTTTACATCG TGCCGTTGTA CGCATTGATC CAGTCACGCA CCGCCGAGAA CGAGCGGGCG CGAGTGATCG CGGCCAACAA CATTCTCAAC GCGCTGTTCA TGGTGGTCTC GGCGATTGTC ACCATCGTGT TGTTGAGTGT GGTGAAACTG TCGATTCCGC AGCTGTTCCT GGTGGTGTCG CTGCTGAACA TCGGCGTCAA CGCCTACATC TTCAAGATCG TCCCCGAGTT CAGCATGCGT TTCATGATCT GGCTGCTCAG CCATTCCATG TACCGCGTCG AGCATCGCAA CCTTGAGGCG ATTCCCGATG AGGGCGCGGC GTTGCTGGTA TGCAACCACG TTTCGTTCGT CGATGCCTTG CTGATCGGCG GCGCGGTGCG TCGGCCGATT CGCTTTGTCA TGTACTACAA GATCTACAAC CTGCCGGTGT TGAACTTTAT CTTCCGCACG GCGGGGACGA TTCCAATCGC CGGACGTCAG GAAGACATTC AGATCTACGA AAAGGCTTTC ACCCGGATTG CCCAGTATCT GAAGGACGGT GAGCTGGTTT GCATCTTCCC GGAGGGCAAG TTGACCGCCG ATGGCGAGAT CAACGAGTTC AAGGGCGGGT TGACGCGGAT TCTCGAAGAG ACACCGGTGC CGGTGATTCC GCTGGCGTTG CAGGGGTTGT GGGGGAGTTT CTTCAGTCGC GATCCGAACA AAGGGGTATT CCGGCGCTTG TGGTCGCGGG TGACGCTGGT GGCGGGTGCA CCGGTCGCCG TGGAAGCGGC GCAGCCGGCG GAGTTGCAGG CGTTGGTCGG GGAGTTGCGC GGGACTGTCA GGTAG
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Protein sequence | MSHPSQFNLL RTRRFLPFFI TQSLGAFNDN VFKQSLILAI LYRLTIEGDR SIWVNLCALL FILPFFLFSA LAGQFGEKFA KDALIRLIKL AEIAIMAVGS VGFLFDHLSL MLVALFAMGT HSALFGPVKY SILPQALRDD ELVGGNGLVE MGTFLAILAG TIGAGVMMSS ANYAPVVSAA IVGIAVLGYL ASRSIPRAAA ATPEMRLNWN IFSQSWATLK LGLGQTPAVS RSIVGNSWFW FVGAIYLTQI PAYAKEWMHG DETVVTLILT VFSVGIALGS MLCEKLSGRK VEIGLVPFGS FGLTVFGLLL WWHSGGIPES AVGHSWTEVL GFGHAWAVLI DVLGLGIFGG FYIVPLYALI QSRTAENERA RVIAANNILN ALFMVVSAIV TIVLLSVVKL SIPQLFLVVS LLNIGVNAYI FKIVPEFSMR FMIWLLSHSM YRVEHRNLEA IPDEGAALLV CNHVSFVDAL LIGGAVRRPI RFVMYYKIYN LPVLNFIFRT AGTIPIAGRQ EDIQIYEKAF TRIAQYLKDG ELVCIFPEGK LTADGEINEF KGGLTRILEE TPVPVIPLAL QGLWGSFFSR DPNKGVFRRL WSRVTLVAGA PVAVEAAQPA ELQALVGELR GTVR
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