Gene Pfl01_1665 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1665 
Symbol 
ID3716799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1856146 
End bp1858020 
Gene Length1875 bp 
Protein Length624 aa 
Translation table11 
GC content60% 
IMG OID 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_347397 
Protein GI77457892 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.054165 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0273745 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCACC CCTCACAGTT CAACCTGCTG CGTACCCGGC GCTTCCTGCC GTTTTTCATC 
ACCCAGTCGC TGGGCGCGTT CAACGATAAC GTGTTCAAGC AGTCGCTGAT CCTCGCCATT
CTCTATCGGC TGACCATCGA GGGTGACCGC TCGATCTGGG TCAACCTGTG TGCGCTGCTG
TTTATTCTGC CGTTCTTTCT GTTCTCGGCG CTGGCCGGGC AGTTCGGGGA AAAATTCGCC
AAGGACGCGT TGATCCGTCT GATCAAACTG GCAGAAATCG CCATCATGGC CGTGGGATCC
GTCGGCTTCC TGTTCGATCA CCTGTCATTG ATGCTGGTGG CGCTGTTCGC CATGGGCACG
CACTCGGCGC TGTTCGGGCC GGTGAAATAT TCGATCCTGC CACAGGCCTT GCGCGACGAC
GAACTGGTCG GCGGCAACGG GCTGGTGGAG ATGGGCACGT TTCTGGCCAT TCTGGCCGGG
ACCATTGGGG CCGGGGTGAT GATGTCGTCG GCCAATTACG CGCCGGTGGT GTCCGCCGCG
ATTGTCGGCA TCGCGGTGCT GGGTTATCTG GCCAGTCGCA GCATCCCGCG CGCAGCAGCG
GCGACCCCGG AAATGCGCCT GAACTGGAAC ATCTTCAGTC AGTCCTGGGC GACCCTGAAA
CTGGGCTTGG GACAGACGCC TGCGGTGTCG CGTTCGATCG TCGGCAACTC GTGGTTCTGG
TTCGTCGGGG CGATTTATCT GACGCAGATC CCGGCTTATG CCAAGGAGTG GATGCACGGC
GACGAAACCG TCGTTACCCT GATTCTGACG GTGTTTTCGG TCGGTATCGC ACTGGGCTCG
ATGCTGTGCG AGAAGCTGTC CGGGCGCAAA GTCGAGATCG GCCTGGTGCC GTTTGGCTCG
TTCGGGCTGA CGGTTTTCGG TTTATTGCTG TGGTGGCATT CCGGTGGAAT CCCGGAAAGC
GCCGTCGGCC ACAGCTGGAC CGAAGTGCTC GGTTTTGGCC ATGCGTGGGC GGTGTTGATC
GATGTGTTGG GCCTCGGAAT TTTCGGCGGT TTTTACATCG TGCCGTTGTA CGCATTGATC
CAGTCACGCA CCGCCGAGAA CGAGCGGGCG CGAGTGATCG CGGCCAACAA CATTCTCAAC
GCGCTGTTCA TGGTGGTCTC GGCGATTGTC ACCATCGTGT TGTTGAGTGT GGTGAAACTG
TCGATTCCGC AGCTGTTCCT GGTGGTGTCG CTGCTGAACA TCGGCGTCAA CGCCTACATC
TTCAAGATCG TCCCCGAGTT CAGCATGCGT TTCATGATCT GGCTGCTCAG CCATTCCATG
TACCGCGTCG AGCATCGCAA CCTTGAGGCG ATTCCCGATG AGGGCGCGGC GTTGCTGGTA
TGCAACCACG TTTCGTTCGT CGATGCCTTG CTGATCGGCG GCGCGGTGCG TCGGCCGATT
CGCTTTGTCA TGTACTACAA GATCTACAAC CTGCCGGTGT TGAACTTTAT CTTCCGCACG
GCGGGGACGA TTCCAATCGC CGGACGTCAG GAAGACATTC AGATCTACGA AAAGGCTTTC
ACCCGGATTG CCCAGTATCT GAAGGACGGT GAGCTGGTTT GCATCTTCCC GGAGGGCAAG
TTGACCGCCG ATGGCGAGAT CAACGAGTTC AAGGGCGGGT TGACGCGGAT TCTCGAAGAG
ACACCGGTGC CGGTGATTCC GCTGGCGTTG CAGGGGTTGT GGGGGAGTTT CTTCAGTCGC
GATCCGAACA AAGGGGTATT CCGGCGCTTG TGGTCGCGGG TGACGCTGGT GGCGGGTGCA
CCGGTCGCCG TGGAAGCGGC GCAGCCGGCG GAGTTGCAGG CGTTGGTCGG GGAGTTGCGC
GGGACTGTCA GGTAG
 
Protein sequence
MSHPSQFNLL RTRRFLPFFI TQSLGAFNDN VFKQSLILAI LYRLTIEGDR SIWVNLCALL 
FILPFFLFSA LAGQFGEKFA KDALIRLIKL AEIAIMAVGS VGFLFDHLSL MLVALFAMGT
HSALFGPVKY SILPQALRDD ELVGGNGLVE MGTFLAILAG TIGAGVMMSS ANYAPVVSAA
IVGIAVLGYL ASRSIPRAAA ATPEMRLNWN IFSQSWATLK LGLGQTPAVS RSIVGNSWFW
FVGAIYLTQI PAYAKEWMHG DETVVTLILT VFSVGIALGS MLCEKLSGRK VEIGLVPFGS
FGLTVFGLLL WWHSGGIPES AVGHSWTEVL GFGHAWAVLI DVLGLGIFGG FYIVPLYALI
QSRTAENERA RVIAANNILN ALFMVVSAIV TIVLLSVVKL SIPQLFLVVS LLNIGVNAYI
FKIVPEFSMR FMIWLLSHSM YRVEHRNLEA IPDEGAALLV CNHVSFVDAL LIGGAVRRPI
RFVMYYKIYN LPVLNFIFRT AGTIPIAGRQ EDIQIYEKAF TRIAQYLKDG ELVCIFPEGK
LTADGEINEF KGGLTRILEE TPVPVIPLAL QGLWGSFFSR DPNKGVFRRL WSRVTLVAGA
PVAVEAAQPA ELQALVGELR GTVR