Gene Pfl01_1660 details

Gene Information

• Locus tag: Pfl01_1660
• ID: 3716794
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas fluorescens Pf0-1
• Kingdom: Bacteria
• Replicon accession: NC_007492
• Strand: -
• Start bp: 1848987
• End bp: 1852457
• Gene Length: 3471 bp
• Protein Length: 1156 aa
• Translation table: 11
• GC content: 62%
• Product: periplasmic sensor hybrid histidine kinase
• Protein accession: YP_347392
• Protein GI: 77457887

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0486727
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 3
• Fosmid unclonability p-value: 0.0112915
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCGTTGT CCACCGGGCT GATCGCCGCC GTCGCCCTGG CCTATATGGC CATCATGTTC 
GCCATCGCCT TCTACGGCGA CCGTCGCAGC ACCCCGCTGC CGCCACGGGT GCGTGCCTGG 
GTGTACAGCC TGTCGCTGGC GGTCTATTGC ACCAGCTGGA CGTTCTTTGG CGCGGTCGGT 
CAGGCCGCCG AACAACTGTG GTCATTCCTG CCGATCTATC TCGGGCCGAT CCTGCTGTTG 
CTCGGTGCGC CGTGGGTGCT GCAGAAAATG GTGATGATCA GCAAACAGGA GAACATCACC 
TCCATTGCCG ACTTCATCGC CGCCCGCTAC GGTAAATCTC AGTCCTTGGC GGTGGTCGTC 
GCGCTGATCT GCCTGGTTGG CGTCCTGCCT TATATCGCCT TGCAGCTCAA AGGCATCGTC 
CTCGGCGTGA ACCTGCTGAT CGGTGCCGGC GCCGACGCCA TGGGCACCCG CGCCCAGGAC 
ACGGCGCTGA TCGTGTCGCT GGTGCTGGCG CTGTTCACCA TCGTTTTCGG TACGCGCAAT 
CTCGATGCCA CCGAGCACCA TCGCGGCATG GTGCTGGCAA TTGCCTTTGA ATCGCTGGTC 
AAACTGTTTG CCTTCCTCGC TGTCGGCGCT TTCGTCACCT ACGGGCTGTA TGACGGTTTC 
GACGACCTGT TCAATCAGGC GATGCTTGCC CCGCGCCTTG AGGAATACTG GAAAGAAACC 
ATCAACTGGC CATCGATGGT GGTGCAGACC GGCGTGGCGA TGATGGCGAT CATCTGCCTG 
CCCCGGCAGT TTCACGTGAC AGTGGTCGAG AACATCGACC CGCAGGATCT GCGCCTGGCC 
AAATGGGTGT TCCCGGCCTA CCTCGCACTG GCTGCGCTGT TTGTAGTCCC GATCGCCCTG 
GCCGGTCAGA TGATGCTGCC CAACTCGGTC ATCCCCGACT CTTTTGTTAT CAGTCTGCCA 
CTGGCTCAGG CCCATCCGGC GCTGGCGATG CTGGCGTTTA TCGGCGGTGC GTCGGCAGCC 
ACCGGCATGG TGATCGTGGC GAGCGTGGCG CTGTCGACCA TGGTCTCCAA CGACATGCTG 
TTGCCGTGGC TGCTACGCCG CAACAATGCC GAGCGCCCGT TCGAAGTGTT CCGCCAGTGG 
ATGCTCTCGG TCCGCCGGGT CAGCATCGTG GTGATTCTGT TGCTGGCTTA CGTCAGCTAC 
CGCTTGCTCG GCTCGACTGC GAGCCTGGCG ACCATCGGCC AGATTGCCTT CGCCGCGGTG 
ACCCAACTGG CCCCGGCAAT GCTCGGCGCG CTGTACTGGA AACAGGCCAA CCGCCGCGGC 
GTGTTTGCCG GCCTCGCCGC CGGCACGTTC CTGTGGTTCT ACACCCTGGT CCTGCCGATC 
GCGGCGCGCA GCCTCGGTTG GTCGCTGGAC AGTTTCCCCG GCCTCGCCTG GCTCCACAGC 
AACCCGCTGA ACCTGCCGAT TACCCCTTTG ACCCAAGGTG TAGTGCTGTC GCTGGCGGGC 
AACTTCACGT TGTTTGCCTG GGTCTCGGTG CTGTCCCGTA CACGAGTGTC GGAGCACTGG 
CAGGCCGGAC GTTTTATCGG TCAGGAAATC AGCGCACGGC CGAGCGCCCG CTCGATGCTG 
GCGGTGCAAA TCGACGACCT GCTGCAACTG GCCGCGCGGT TTGTCGGTGA AGAACGCGCC 
CGGCAGAGTT TCATTCGCTT CGCCTATCGT CAGGGCAAAG GCTTCAACCC GAATCAGAAC 
GCTGACGGTG AATGGATCGC CCACACCGAG CGCTTGCTGG CGGGTGTTCT TGGTGCGTCT 
TCGACGCGAG CTGTAGTAAA AGCCGCCATC GAAGGTCGGG AAATGCAACT GGAGGACGTC 
GTCCGAATCG CCGACGAAGC GTCGGAAGTG TTGCAGTTCA ACCGTGCGCT GCTGCAAGGC 
GCCATCGAAA ACATTACCCA AGGCATCAGC GTGGTCGACC AATCGCTGAA ACTGGTGGCA 
TGGAACCGCC GCTATCTGGA GCTGTTCAAC TATCCGGACG GTTTGATCAG CGTTGGCCGG 
CCGATCGCCG ACATCATTCG CCACAACGCC GAGCGTGGTT TGTGCGGCCC CGGTGAAGCG 
GAAGTTCACG TCGCCCGGCG CCTGCACTGG ATGCGTCAGG GTCGTGCTCA CACTTCCGAG 
CGTTTGTTCC CCAACGGCCG GGTGATCGAA CTGATCGGCA ACCCGATGCC GGGCGGCGGT 
TTCGTCATGA GTTTCACCGA CATCACCGCG TTCCGCGAAG CCGAACAGGC CCTGACCGAG 
GCTAACGAAG GGCTGGAGCA ACGGGTCAGC GAACGGACCC AGGAACTGTC GCAACTCAAC 
GTCGCACTGA CCGAAGCCAA GGGCAATGCC GAGGCGGCCA ACCAGTCGAA AACCCGTTTC 
CTCGCAGCGG TCAGCCACGA CTTGATGCAG CCTTTGAACG CCGCACGCTT GTTCTCCGCC 
GCCCTCTCCC ATCAGGCCGA CGGCTTGAGC GAGGAAGCGC AGAAACTGGT GCAGCATCTG 
GACAGTTCGC TGCGTTCGGC CGAAGACCTG ATCAGCGACC TGCTGGACAT TTCCCGCCTG 
GAAAACGGCA AGATCAACCC GGATCGCAAG CCGTTCGCGG TCAATGAGCT GTTCGATATT 
CTCGGTGCCG AGTTCAAGGC ACTGGCCCAG GAACAAGGCC TGAGTTTCCG GGTACGTGGC 
AGTCAGCTGC GCATCGACAG CGACATCAAG TTGCTGCGAC GCATTCTGCA GAATTTCCTG 
ACCAACGCGT TCCGCTACGC AAAAGGCCCG GTGCTGCTGG GCGTGCGTCG GCGTAAAGGC 
GAAATCTGTC TGGAAGTGTG GGATCGCGGA CCGGGGATTC CGGAGGACAA ACAGCAAGTG 
ATCTTCGAGG AGTTCAAACG CCTCGACAGT CACCAGACCC GCGCCGAAAA AGGTCTGGGC 
CTGGGCCTGG CGATCGCCGA TGGCCTGTGC CGCGTACTCG GCCACACCTT GCGTGTGCGC 
TCATGGCCGG GGCGCGGCAG CGTGTTCAGC GTTCGTGTGC CGTTGGCCAA AGCGCAGACC 
GTGCAGCCAA CCGCGGCGGT GGAAATAAAC GGTAAATTGC ACAGCGGCGC GCAGGTGCTG 
TGCATCGACA ACGAAGACAG CATTCTGATC GGCATGAACA GCCTGCTCAC GCGCTGGGGC 
TGTCAGGTGT GGACGGCGCG CAACCGCGAA GAATGCGCGG CACTGCTCGA CGAGGGCGTG 
CGCCCACAGT TGGCACTGGT GGACTATCAC CTGGATCACG GCGAAACCGG CACCGAGTTG 
ATGGCGTGGT TGCGCACAAG GCTGGGCGAG CCGGTGCCGG GCGTGGTGAT CAGCGCCGAC 
GGACATCCGG AAACCGTGGC CCAGGTGCAC GCGGCGGGGC TGGATTACCT GGCCAAACCG 
GTGAAACCGG CGGCGTTGCG GGCGTTGTTG AGTCGCTACT TGCCGCTCTA G 

 

Protein sequence

MSLSTGLIAA VALAYMAIMF AIAFYGDRRS TPLPPRVRAW VYSLSLAVYC TSWTFFGAVG 
QAAEQLWSFL PIYLGPILLL LGAPWVLQKM VMISKQENIT SIADFIAARY GKSQSLAVVV 
ALICLVGVLP YIALQLKGIV LGVNLLIGAG ADAMGTRAQD TALIVSLVLA LFTIVFGTRN 
LDATEHHRGM VLAIAFESLV KLFAFLAVGA FVTYGLYDGF DDLFNQAMLA PRLEEYWKET 
INWPSMVVQT GVAMMAIICL PRQFHVTVVE NIDPQDLRLA KWVFPAYLAL AALFVVPIAL 
AGQMMLPNSV IPDSFVISLP LAQAHPALAM LAFIGGASAA TGMVIVASVA LSTMVSNDML 
LPWLLRRNNA ERPFEVFRQW MLSVRRVSIV VILLLAYVSY RLLGSTASLA TIGQIAFAAV 
TQLAPAMLGA LYWKQANRRG VFAGLAAGTF LWFYTLVLPI AARSLGWSLD SFPGLAWLHS 
NPLNLPITPL TQGVVLSLAG NFTLFAWVSV LSRTRVSEHW QAGRFIGQEI SARPSARSML 
AVQIDDLLQL AARFVGEERA RQSFIRFAYR QGKGFNPNQN ADGEWIAHTE RLLAGVLGAS 
STRAVVKAAI EGREMQLEDV VRIADEASEV LQFNRALLQG AIENITQGIS VVDQSLKLVA 
WNRRYLELFN YPDGLISVGR PIADIIRHNA ERGLCGPGEA EVHVARRLHW MRQGRAHTSE 
RLFPNGRVIE LIGNPMPGGG FVMSFTDITA FREAEQALTE ANEGLEQRVS ERTQELSQLN 
VALTEAKGNA EAANQSKTRF LAAVSHDLMQ PLNAARLFSA ALSHQADGLS EEAQKLVQHL 
DSSLRSAEDL ISDLLDISRL ENGKINPDRK PFAVNELFDI LGAEFKALAQ EQGLSFRVRG 
SQLRIDSDIK LLRRILQNFL TNAFRYAKGP VLLGVRRRKG EICLEVWDRG PGIPEDKQQV 
IFEEFKRLDS HQTRAEKGLG LGLAIADGLC RVLGHTLRVR SWPGRGSVFS VRVPLAKAQT 
VQPTAAVEIN GKLHSGAQVL CIDNEDSILI GMNSLLTRWG CQVWTARNRE ECAALLDEGV 
RPQLALVDYH LDHGETGTEL MAWLRTRLGE PVPGVVISAD GHPETVAQVH AAGLDYLAKP 
VKPAALRALL SRYLPL