Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1655 |
Symbol | |
ID | 3716789 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 1843757 |
End bp | 1845028 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | aromatic hydrocarbon degradation protein |
Protein accession | YP_347387 |
Protein GI | 77457882 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0166252 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00574559 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAAAG TCATGCTCAA AACCACCCTT AGCCTTGCCG TAACCGTGGC ATCCACCCAG ATCTTCGCGG CTGGCTTTGC CATCAACGAA CACAGCATCA GCGGGATGGG GACTGGGTAC GCCGGGCGAT CTTCTTCTGC CGACGACGCA AGCACTGTTT ACGGCAACCC TGCCGGCATG TCGCGCATCA CGCGCGAACA AGTCACCGGT GGCGTTGCAT TCCTCGATGC AAAAACCGAT ATCAGCGACG CCAGCTCCAG CCCGAACGGC GGCAGCAACA AAGGCGACAT GGTGCCCTTC ACCTCCGTAC CTATGGGTTA CTACGTCAAG CCGATCGACG AGCATTGGGC ATTCGGTCTG GGTGTGTACG TACCCTTCGG CCTGATCACC GACTATGAAA ACGGCTTCGC CGGCCGTTAC TTCGGCAGCA AGTCCGAAGT CAAGATCATT ACCTTCCAGC CAACCGTCAG CTACAAGTTC AACGACGTCG TGTCGATCGG TTTCGGCCCG ACCATCAACC GTATCGACGG CTCGCTTGAA TCTAACCTGT CGATCACTCA GGCTGCGCCG GACGGCAAGG TCAAGATCAA GGGTGACGAC ACCGCACTGG GCTACAACAT CGGGGTGCTG GTACAGGCTA CCGACAGCAC TCGCCTGGGT CTGACCTACC ACTCGAAAGT CGACTACAAG CTCGAAGGCA ACACCAAGGT CAACTACGGT GTGCTGGGCG CGATCGGCCT GGGTGCGAAC CAGAAGTACG ACGCTTCGCT GAAGATCACC ACGCCTGAAT CCGTGGACCT CTCGGTCACC CAGGCGATCA ACGATCGCTG GAACGTCTAC GCCGGTACCA CCTGGACCCG CTGGAGCCAG CTGGAAAAGA TCACCGTCAA GAACTCCGGC GTTCAGCCAC TGCTGGCTGG CCAGTTCGGC GAGATCACCG AAGAACAGAA CTGGCATGAC ACCTGGGCGT ACGCCATCGG TACGTCCTAC CAACTGAACA AGGAATGGGT ACTGCGTACC GGTCTGACGT TCGACCAGTC GCCGACCAAC AACGTCGACC GTTCGCCACG CATACCGACC GGCGACCGGA CCATCTTCAG TATCGGTGCC GGCTGGAGCC CGACCGAAGA CCTGACCATC GACGTTGCCT ACTCGTACCT GAAGGAAGAG AAGGTCAACA TTCGCAACAC AAACGATCGT GGCCAGAGCT ACAACTCGCA GTATGAAAAC TCGGCAAACG GCTTCGGTGT CGGCGCAACC TACCGCTTCT GA
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Protein sequence | MKKVMLKTTL SLAVTVASTQ IFAAGFAINE HSISGMGTGY AGRSSSADDA STVYGNPAGM SRITREQVTG GVAFLDAKTD ISDASSSPNG GSNKGDMVPF TSVPMGYYVK PIDEHWAFGL GVYVPFGLIT DYENGFAGRY FGSKSEVKII TFQPTVSYKF NDVVSIGFGP TINRIDGSLE SNLSITQAAP DGKVKIKGDD TALGYNIGVL VQATDSTRLG LTYHSKVDYK LEGNTKVNYG VLGAIGLGAN QKYDASLKIT TPESVDLSVT QAINDRWNVY AGTTWTRWSQ LEKITVKNSG VQPLLAGQFG EITEEQNWHD TWAYAIGTSY QLNKEWVLRT GLTFDQSPTN NVDRSPRIPT GDRTIFSIGA GWSPTEDLTI DVAYSYLKEE KVNIRNTNDR GQSYNSQYEN SANGFGVGAT YRF
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