Gene Pfl01_1625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1625 
Symbol 
ID3716837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1815340 
End bp1817244 
Gene Length1905 bp 
Protein Length634 aa 
Translation table11 
GC content58% 
IMG OID 
Productheat shock protein 90 
Protein accessionYP_347357 
Protein GI77457852 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0598838 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTGG AAACTCAAAA GGAAACCCTG GGCTTCCAGA CCGAGGTGAA GCAACTGCTG 
CACCTCATGA TCCATTCGCT GTATTCCAAC AAGGAAATCT TCCTTCGCGA ATTGATCTCG
AACGCCTCTG ACGCCGTCGA CAAATTGCGC TTCGAAGCCC TGGCCAAGCC TGAGCTGCTC
GAAGATGGCG CTGAACTGAA AATCCGTGTG AGCTTCGACA AGGACGCCAA GACCGTCACC
CTCGAAGACA ACGGCATCGG CATGAACCGT GACGATGTGA TCACCCACCT GGGTACCATC
GCCAAATCCG GCACTGCCGA TTTCATGAAA AACCTGTCCG GCGATCAGAA GAAGGATTCG
CACCTGATCG GTCAGTTCGG TGTGGGTTTC TACTCGGCCT TCATCGTTGC TGACAAAGTT
GACGTGTACA GCCGTCGCGC CGGCACTGCT GCCAGCGAAG GCGTGCACTG GTCGTCGAAA
GGCGAGGGCG AATTCGAAGT CGCCACCATC GACAAGCCGG AGCGCGGCAC CCGCATCGTC
CTGCACCTGA AATCCGGTGA AGAGGAGTTT GCCGATGGCT GGCGCCTGCG CAACATCATC
AAGAAGTACT CCGACCACAT CGCGCTGCCG ATCGAGCTGC CGAAAGAAGT GGCCGCTGCC
GAAGGCGAAG AGAAGCCTGA AGTTGAATGG GAAACCGTCA ACCGCGCCAG CGCCCTGTGG
ACCCGCCCTC GCACCGAAGT GAAGGACGAG GAATACCAGG AGTTCTACAA ACATATCGCT
CACGACTTCG AAAACCCGCT GTCGTGGAGT CACAACAAGG TTGAAGGCAA GCTTGAGTAC
AGCTCGCTGC TGTATGTGCC GGCCCGCGCA CCGTTCGATC TGTACCAGCG TGAAGCGCCG
AAAGGCCTGA AGCTGTACGT GCAGCGCGTG TTCGTGATGG ATCAGGCCGA GTCCTTCCTG
CCGCTGTACC TGCGCTTCAT CAAGGGCGTG GTCGATTCCA ACGACCTGTC GCTGAACGTG
TCGCGGGAAA TCCTGCAGAA AGACCCGATC ATCGACTCGA TGAAGTCGGC GCTGACCAAG
CGTGTTCTGG ACATGCTGGA AAAACTGGCG AAGAACGAGC CTGAGCAATA CAAGGGCTTC
TGGAAAAACT TCGGTCAGGT CATGAAAGAA GGCCCGGCAG AAGATTTCGC CAACAAGGAA
AAAATTGCCG GTCTGTTGCG TTTCGCATCG ACCAACGGCA CCGATGGCGA GCAGATCGTC
GGTCTGGCCG AGTACCTGGC GCGCGCCAAG GAAGGTCAGG ACAAGATCTA CTACCTCACC
GGCGAAACCT ACGCGCAGGT CAAGAACAGC CCGCACCTGG AAGTCTTCCG CAAGAAAGGC
ATCGAAGTGC TGCTGCTGAC CGACCGTATC GACGAGTGGC TGATGAGCTA CCTCAGCGAA
TTCGACGGCA AGACGTTTGT CGACGTCGCG CGCGGTGACC TGGACCTGGG CAACCTGGAC
TCGGAAGAGG ACAAGAAGGC CGCAGAAGAA GTCGCCAAGT CGAAAGAAGG TCTGGTCGAG
CGTCTGAAAA CCGCACTGGG CGATTCCGTT GCCGAAGTCC GGGTTTCCCA TCGCCTGACC
GATTCGCCGG CCATCCTGGC GATTGGCGAG CAGGACCTGG GTCTGCAAAT GCGTCAGATC
CTTGAAGCCA GTGGGCAGAA GGTGCCGGAT TCGAAGCCTA TCTTCGAATT CAACCCGAGC
CACCCGCTGA TCGAGAAGCT CGACAACGAG GCCAGCGAAG ATCGCTTCAG CGACCTGTCG
CACATCCTCT TCGACCAGGC CGCCCTGGCG GCGGGCGACA GCTTGAAAGA CCCGGCCGCT
TACGTGAGCC GTCTGAACAA GCTGCTGGTT GAGCTGTCGG CCTGA
 
Protein sequence
MSVETQKETL GFQTEVKQLL HLMIHSLYSN KEIFLRELIS NASDAVDKLR FEALAKPELL 
EDGAELKIRV SFDKDAKTVT LEDNGIGMNR DDVITHLGTI AKSGTADFMK NLSGDQKKDS
HLIGQFGVGF YSAFIVADKV DVYSRRAGTA ASEGVHWSSK GEGEFEVATI DKPERGTRIV
LHLKSGEEEF ADGWRLRNII KKYSDHIALP IELPKEVAAA EGEEKPEVEW ETVNRASALW
TRPRTEVKDE EYQEFYKHIA HDFENPLSWS HNKVEGKLEY SSLLYVPARA PFDLYQREAP
KGLKLYVQRV FVMDQAESFL PLYLRFIKGV VDSNDLSLNV SREILQKDPI IDSMKSALTK
RVLDMLEKLA KNEPEQYKGF WKNFGQVMKE GPAEDFANKE KIAGLLRFAS TNGTDGEQIV
GLAEYLARAK EGQDKIYYLT GETYAQVKNS PHLEVFRKKG IEVLLLTDRI DEWLMSYLSE
FDGKTFVDVA RGDLDLGNLD SEEDKKAAEE VAKSKEGLVE RLKTALGDSV AEVRVSHRLT
DSPAILAIGE QDLGLQMRQI LEASGQKVPD SKPIFEFNPS HPLIEKLDNE ASEDRFSDLS
HILFDQAALA AGDSLKDPAA YVSRLNKLLV ELSA