| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1619 |
|---|
| Symbol | |
|---|
| ID | 3716831 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 1811257 |
|---|
| End bp | 1812570 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | branched chain amino acid ABC transporter carrier protein |
|---|
| Protein accession | YP_347351 |
|---|
| Protein GI | 77457846 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.758971 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0622571 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTTT TGAAAGGTCA GGACATCCTG GCACTTGGCT TTATGACATT CGCCCTGTTC
GTCGGGGCCG GCAACATCAT CTTCCCGCCT ATCGTCGGTT TGCAGTCCGG GCCTAACGTC
TGGATCGCGG CGCTGGGCTT CCTGATCACG GCAGTCGGTC TGCCGGTGGT CACCGTGGTT
GCACTGGCCA AGGTCGGTGG CGCAATGGAC GCCCTGAGCA GCCCGATCGG CAAGGTCGCC
GGTGGCGTAC TGGCTGCCGC GTGCTACCTG GCAGTCGGCC CGCTGTTCGC CACCCCGCGT
ACCGCGACCG TTTCCTTTGA AGTGGGTTTG GCGCCGCTGA CCGGCGAGAG CCCGCTGGCA
CTGTTCCTCT ACAGTTCGGT GTACTTCCTG CTGGTGTTCT TCATTTCGCT CTACCCTGGG
CGTCTGCTGG ACACCGTCGG TCGCTTCCTC GCACCCCTGA AGATCATTGC TCTGGCCGTG
CTCGGCATCG CCGCATTCGC ACTGCCGGCC GGTGACATCG GCGTGGCCAC TCCGGAATAC
GTTGCGGCAC CGTTCTCCCA AGGTTTCATC AATGGTTACC TGACCATGGA TACCCTCGGC
GCGCTGGTGT TCGGCATCGT CATCGTCAAC GCGATCCGCT CCCGTGGCGT CGAGTCGCCG
GCGCTGATCA CCCGGTACGC GATCATCGCC GGGCTGATTG CCGGCGTCGG TCTGGCGCTG
GTGTATGTCA GCCTGTTCCG TCTGGGTTCC GGCAGCCATG AAGTGGCCGC TGGCGCTACC
AATGGCGCGG CGGTGCTGCA CGCTTACGTG CAACACACCT TCGGTTCGCT GGGTAGCGGT
TTCCTTGCGG TGCTGATCTC GCTGGCCTGC CTGGTGACGG CGGTCGGTCT GACCTGCGCC
TGTGCTGAGT ACTTCAGCCG CGTGTTGCCA CTGTCCTACA AGACACTGGT GATCATCCTG
GCTGCATTCT CGCTGCTGGT ATCCAACCTG GGCCTGACCA AGCTGATCGC GTTCTCGATC
CCGGTGCTCA CCGCGATCTA CCCGCCGTGC ATCGTGCTGG TGGCCCTGAG CTTCTGCGCC
GCGTTCTGGC ATGAGCAGAG CCGCATCATG GGCCCGGTGA TGCTGGTGTC GTTCGTGTTC
GGCACCATCG ATGCGCTGAA AGGCGCCGGT CTGGCGGACT GGATGCCATC GCAACTGGCC
CACCTGCCGC TCAGCGAGCA AGGTCTGGCG TGGCTGGTGC CGTGCGTGAT GACCCTGGTG
GTTGCCGTGG TTTGCGACCG CCTGCTGGGC AAGCGCGCCG AAGCACTCGC TTAA
|
|---|
| Protein sequence | MKVLKGQDIL ALGFMTFALF VGAGNIIFPP IVGLQSGPNV WIAALGFLIT AVGLPVVTVV
ALAKVGGAMD ALSSPIGKVA GGVLAAACYL AVGPLFATPR TATVSFEVGL APLTGESPLA
LFLYSSVYFL LVFFISLYPG RLLDTVGRFL APLKIIALAV LGIAAFALPA GDIGVATPEY
VAAPFSQGFI NGYLTMDTLG ALVFGIVIVN AIRSRGVESP ALITRYAIIA GLIAGVGLAL
VYVSLFRLGS GSHEVAAGAT NGAAVLHAYV QHTFGSLGSG FLAVLISLAC LVTAVGLTCA
CAEYFSRVLP LSYKTLVIIL AAFSLLVSNL GLTKLIAFSI PVLTAIYPPC IVLVALSFCA
AFWHEQSRIM GPVMLVSFVF GTIDALKGAG LADWMPSQLA HLPLSEQGLA WLVPCVMTLV
VAVVCDRLLG KRAEALA
|
|---|
| |