Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1608 |
Symbol | actP |
ID | 3716820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1795212 |
End bp | 1796870 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | acetate permease |
Protein accession | YP_347340 |
Protein GI | 77457835 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.409391 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGGC GTCTACTGGC TCTTTTGAGC ATCGCAGCGT TCGCTCCGGC CGTCTGGGCC GCTGACGCCC TGACCGGCGA AGTCCACAAA CAACCACTCA ACGTTTCCGC GATCGTCATG TTCGTGGTGT TCGTTGGCGC GACCCTGTGC ATCACCTACT GGGCGTCCAA GCGCAACAAG TCGGCGGCCG ACTACTATGC GGCGGGCGGC AAGATCACCG GTTTCCAGAA CGGTCTGGCA ATTGCCGGTG ACTACATGTC GGCGGCGTCC TTCCTGGGTA TTTCCGCGCT GGTGTTCACC TCCGGCTACG ACGGCCTGAT CTACTCGATC GGCTTCCTGG TGGGCTGGCC GATCATTCTG TTCCTGATCG CCGAGCGTCT GCGTAACTTG GGTAAATACA CCTTTGCCGA CGTGGCGTCC TACCGCCTCG GGCAAACCCA GATCCGCACC CTGTCGGCCT GCGGTTCGCT GGTGGTGGTA GCGTTCTACC TGATCGCGCA AATGGTCGGT GCCGGCAAGC TGATCCAGCT GCTGTTCGGT CTCGACTACC ACGTCGCGGT GATTCTGGTC GGTATCCTGA TGTGCCTGTA CGTGCTGTTC GGCGGCATGC TGGCGACTAC CTGGGTGCAG ATCATCAAGG CGGTGCTGTT GCTGTCCGGT GCCTCGTTCA TGGCGCTGAT GGTGATGAAG CACGTCAACT TCGACTTCAA CACCCTGTTC TCCGAAGCCA TCAAGGTTCA CGCCAAGGGT GAAGCGATCA TGAGCCCGGG CGGTCTGGTC AAAGACCCGA TCTCGGCGTT CTCCCTGGGT CTGGCGCTGA TGTTCGGTAC CGCCGGCCTG CCGCACATCC TGATGCGCTT CTTCACCGTT AGCGACGCGA AAGAAGCCCG TAAGAGCGTG CTGTACGCGA CCGGTTTCAT TGGCTACTTC TACATCCTGA CCTTCATCAT CGGCTTCGGC GCGATCCTGC TGGTCAGCAC CAACCCGGCC TTCAAAGATG CGGCGGGCGC TCTACTCGGC GGCAACAACA TGGCGGCGGT GCACCTGGCC AATGCCGTGG GCGGCAGCGT GTTCCTCGGC TTCATCTCGG CGGTAGCGTT CGCGACCATT CTGGCGGTCG TGGCCGGTCT GACCCTGGCC GGGGCTTCGG CGGTGTCTCA CGACCTGTAC GCCAGCGTGA TCAAGAAGGG CAAGGCCAAC GAGAAGGATG AGATCCGCGT TTCGAAGATC ACCACCATCG CGCTGGGCGT TCTGGCCATT GGCCTGGGCA TCCTGTTCGA AAGCCAGAAC ATTGCGTTCA TGGTTGGCCT GGCGTTCTCC ATCGCGGCAA GCTGCAACTT CCCGGTGCTG CTGCTTTCGA TGTACTGGAA GAAGCTGACC ACTCGTGGCG CCATGATTGG CGGCTGGCTG GGCCTGGTGA GTGCGGTGGG TCTGATGATT CTTGGCCCGA CCATCTGGGT GCAGATTCTG CATCATGAGA AGGCGATCTT CCCTTACGAG TATCCGGCGT TGTTCTCGAT GATCATTGCG TTTATCGGGA TCTGGTTCTT CTCGGTCACC GATAAGTCGG CCGAAGCCGA GAATGAGCGT GCGCTGTTCT TCCCGCAGTT TGTGCGTTCG CAGACTGGGT TGGGGGCTAG TGGGGCGGTT TCGCACTGA
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Protein sequence | MIRRLLALLS IAAFAPAVWA ADALTGEVHK QPLNVSAIVM FVVFVGATLC ITYWASKRNK SAADYYAAGG KITGFQNGLA IAGDYMSAAS FLGISALVFT SGYDGLIYSI GFLVGWPIIL FLIAERLRNL GKYTFADVAS YRLGQTQIRT LSACGSLVVV AFYLIAQMVG AGKLIQLLFG LDYHVAVILV GILMCLYVLF GGMLATTWVQ IIKAVLLLSG ASFMALMVMK HVNFDFNTLF SEAIKVHAKG EAIMSPGGLV KDPISAFSLG LALMFGTAGL PHILMRFFTV SDAKEARKSV LYATGFIGYF YILTFIIGFG AILLVSTNPA FKDAAGALLG GNNMAAVHLA NAVGGSVFLG FISAVAFATI LAVVAGLTLA GASAVSHDLY ASVIKKGKAN EKDEIRVSKI TTIALGVLAI GLGILFESQN IAFMVGLAFS IAASCNFPVL LLSMYWKKLT TRGAMIGGWL GLVSAVGLMI LGPTIWVQIL HHEKAIFPYE YPALFSMIIA FIGIWFFSVT DKSAEAENER ALFFPQFVRS QTGLGASGAV SH
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