| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1562 |
|---|
| Symbol | |
|---|
| ID | 3716987 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 1752319 |
|---|
| End bp | 1753149 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | cobyrinic acid a,c-diamide synthase |
|---|
| Protein accession | YP_347294 |
|---|
| Protein GI | 77457789 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.100295 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0484178 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAGCA TGCATCCCGT ACAGGTGATC GCGGTGACCG GCGGCAAAGG TGGCGTCGGC
AAGACTAATG TGTCAGTGAA CTTGTCCCTG GCCCTGGCAG AGCTTGGCCG TCGGGTCATG
CTGCTGGACG CCGACCTGGG GCTGGCGAAC GTCGACGTTC TGCTGGGCCT CACACCCAAA
CGAACCCTGG CCGACGTGAT CGAAGGCCGC TGCGAGCTGC GCGACGTGCT GTTGCAGGGC
CCCGGCGGGA TCCGCATCGT GCCGGCCGCT TCCGGCACCC AGAGCATGGT TCACCTGAGC
CCGGCCCAGC ATGCCGGCCT GATTCAGGCC TTCAGCGACA TCGGCGACAA TCTCGACGTG
CTGGTGATCG ACACCGCTGC GGGTATTGGT GACTCGGTAG TCAGTTTTGT TCGCGCAGCG
CAAGAAGTGT TGCTGGTGGT CTGCGACGAG CCGACCTCGA TCACCGACGC CTACGCGCTG
ATCAAGCTGC TCAACCGCGA TTACGGCATG AACCGCTTCC GCGTCCTGGC CAACATGGCC
CAGAGCCCGC AGGAAGGTCG CAATCTGTTC GCCAAGTTGA CCAAGGTCAC GGATCGCTTC
CTCGACGTCG CCCTACAATA CGTCGGCGCG GTGCCCTACG ACGAAAGCGT GCGCAAGGCG
GTGCAGAAGC AGCGTGCGGT CTATGAAGCC TTCCCGCGTT CCAAGTGCGC ACTGGCGTTC
AAGGCGATCG CACAGAAGGT CGACACCTGG CCGCTGCCCG CCAACCCGCG CGGCCACCTC
GAATTTTTCG TCGAGCGCCT CGTGCAGCAA ACGGCAGGAC CTGTGCTATG A
|
|---|
| Protein sequence | MGSMHPVQVI AVTGGKGGVG KTNVSVNLSL ALAELGRRVM LLDADLGLAN VDVLLGLTPK
RTLADVIEGR CELRDVLLQG PGGIRIVPAA SGTQSMVHLS PAQHAGLIQA FSDIGDNLDV
LVIDTAAGIG DSVVSFVRAA QEVLLVVCDE PTSITDAYAL IKLLNRDYGM NRFRVLANMA
QSPQEGRNLF AKLTKVTDRF LDVALQYVGA VPYDESVRKA VQKQRAVYEA FPRSKCALAF
KAIAQKVDTW PLPANPRGHL EFFVERLVQQ TAGPVL
|
|---|
| |