Gene Pfl01_1560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1560 
SymbolflhA 
ID3716985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1748724 
End bp1750853 
Gene Length2130 bp 
Protein Length709 aa 
Translation table11 
GC content61% 
IMG OID 
Productflagellar biosynthesis protein FlhA 
Protein accessionYP_347292 
Protein GI77457787 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.253962 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATCGCT CTCAGTTAAT CAACAGTGCT CGCTCGAACA TTGCCGACCT CAGTCGAGGC 
AATCTGGGTG TGCCGCTGTT GCTGCTGGTC ATGCTGGCGA TGATGATGTT GCCGGTGCCG
CCGTTCCTGC TCGACGTGTT CTTCACCTTC AACATTGCCC TGTCGATCGT CGTGCTGCTG
GTCTGCGTGT ACGCCTTGCG GCCGCTGGAT TTTGCGGTGT TCCCGACGAT CCTGCTGGTG
GCGACGCTGT TGCGACTGGC GCTGAACGTG GCGTCGACGC GGGTGGTGAT GCTCCACGGT
CAGGACGGCC ACGCCGCCGC CGGTAAGGTG ATCCAGGCCT TCGGTGAGGT GGTGATCGGC
GGTAACTACG TGGTCGGTAT CGTGGTCTTC GCGATCCTGA TGATCATCAA CTTCGTCGTG
GTGACCAAGG GTGCTGGCCG GATCTCCGAG GTGAGCGCTC GCTTCACCCT CGATGCGATG
CCCGGCAAGC AAATGGCGAT CGACGCCGAC CTCAACGCCG GTCTGATCGA CCAGGCGCAG
GCCAAGGCCC GTCGTCAGGA AGTGGCTCAA GAGGCAGAGT TCTACGGCTC GATGGATGGT
GCCAGCAAGT TCGTCCGTGG TGACGCCATC GCCGGCCTGC TGATTCTGTT CATCAACCTG
ATCGGCGGCA TGGCCGTCGG TATCTTCCAG CACAACATGA CTTTCGCCGA CGCGGGCAAG
GTTTACGCCT TGCTGACCAT CGGTGACGGT TTAGTGGCGC AATTGCCATC ACTGTTGTTA
TCTACAGCTG CAGCGATCAT GGTGACTCGT GCTTCCGGCT CGGAAGACAT GGGCAAGCAG
ATCAATCGCC AGATGTTCGC CTCGCCCAAA GCGCTGGCGG TGGCGGCCGG TCTGATGGCG
GTCATGGGTC TGGTGCCGGG CATGCCGCAC TTCTCGTTCC TGAGCATGGC TGCCCTGGCT
GCCGGTGGTG CTTACCTGTT CTGGAAGAAG CAGAACGTCG CCAAAGTGCA GGCGCTGCAA
GAGGTTCAGC GTCAACAGGA ACTGCTGCCG TCGCCGGCCC GCGCCATGGA AACCAAGGAG
CTGGGCTGGG ACGACGTGAC CCCGATCGAC ATGATCGGCC TGGAAGTCGG CTACCGCCTG
ATTCCGCTGG TGGACCGCAA CCAGGGCGGG CAATTGCTGG CGCGGATCAA GGGCGTGCGC
AAGAAGCTCT CGCAGGATCT GGGCTTTCTG ATGCCGACCG TGCACATCCG CGACAACCTC
GACCTCGCGC CGAGCGCCTA TCGCCTGACC CTGATGGGCG TGATTCTGGC CGAAGCCGAG
ATCTACCCGG ATCGCGAACT GGCGATCAAC CCGGGGCAGG TCTACGGCTC GCTCAACGGC
ATTACCGCCA AAGATCCGGC TTTCGGCCTG GAGGCGGTGT GGATCGAAGT CAGCCAGCGC
GCCCAGGCGC AATCGCTCGG TTACACCGTG GTCGATGCCA GCACCGTGGT TGCGACCCAC
TTGAACCAGA TTCTGTACAA GCACTCCAGC GAGCTGATCG GCCACGAAGA AGTGCAGCAA
TTGATGCAAT TGCTGGCCAA GAGCTCGCCG AAACTGGCTG AAGAGCTGGT GCCGGGCGTG
GTCACGCTGT CGCAACTGCT CAAGGTGTTG CAGGCGTTGC TGGCCGAGCA CGTGCCGGTG
CGCGATATCC GCAGCATTGC CGAGGCCATC GCCAACAATG CCGCCAAGAG TCAAGATACC
GCCGCTTTGG TGGCTGCTGT GCGGGTTGGC GTATCGCGCG CCATCGTCCA AAGCATTGTA
GGGACTGAGT CGGAGCTGCC AGTTATCACG CTGGAGCCAA GGTTGGAACA AATATTGCTC
AATAGTCTGC AGAAGGCAGG ACAAGGCTCG GAAGAGGGCG TTCTGCTGGA GCCGAGCATG
GCCGAGAAGC TGCAGCGTTC GCTGATCGAA GCGGCGCAGC GCCAGGAAAT GCAAGGTCAG
CCGGTGATTC TGTTGGTAGC AGGCCCGGTT CGCGCGATGC TCTCGCGCTT TGGTCGCCTG
GCAGTTCCCG GACTGCATGT GCTGGCCTAC CAGGAAATTC CGGACAACAA GCAAGTGACC
ATCGTTGCGA CAGTAGGGCC CAACGGCTGA
 
Protein sequence
MDRSQLINSA RSNIADLSRG NLGVPLLLLV MLAMMMLPVP PFLLDVFFTF NIALSIVVLL 
VCVYALRPLD FAVFPTILLV ATLLRLALNV ASTRVVMLHG QDGHAAAGKV IQAFGEVVIG
GNYVVGIVVF AILMIINFVV VTKGAGRISE VSARFTLDAM PGKQMAIDAD LNAGLIDQAQ
AKARRQEVAQ EAEFYGSMDG ASKFVRGDAI AGLLILFINL IGGMAVGIFQ HNMTFADAGK
VYALLTIGDG LVAQLPSLLL STAAAIMVTR ASGSEDMGKQ INRQMFASPK ALAVAAGLMA
VMGLVPGMPH FSFLSMAALA AGGAYLFWKK QNVAKVQALQ EVQRQQELLP SPARAMETKE
LGWDDVTPID MIGLEVGYRL IPLVDRNQGG QLLARIKGVR KKLSQDLGFL MPTVHIRDNL
DLAPSAYRLT LMGVILAEAE IYPDRELAIN PGQVYGSLNG ITAKDPAFGL EAVWIEVSQR
AQAQSLGYTV VDASTVVATH LNQILYKHSS ELIGHEEVQQ LMQLLAKSSP KLAEELVPGV
VTLSQLLKVL QALLAEHVPV RDIRSIAEAI ANNAAKSQDT AALVAAVRVG VSRAIVQSIV
GTESELPVIT LEPRLEQILL NSLQKAGQGS EEGVLLEPSM AEKLQRSLIE AAQRQEMQGQ
PVILLVAGPV RAMLSRFGRL AVPGLHVLAY QEIPDNKQVT IVATVGPNG