Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1551 |
Symbol | fliR |
ID | 3716976 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1737540 |
End bp | 1738325 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | flagellar biosynthesis protein FliR |
Protein accession | YP_347283 |
Protein GI | 77457778 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00272266 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.357527 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATCGC TGCTTCAGCT GACCGATGCC CAGATCAGTA CCTGGGTGGC GACGTTCATG CTGCCGCTGT TTCGCGTCGC CTCGATGTTG ATGGTGATGC CGGTCTTCGG AACCACGCTG GTGCCCCGGC GGATCCGTCT GTATTTCGCC TTCGCGATCA CCGTGGTGAT CACGCCCAAC CTGCCGCCGA TGCCGGCGGT CAGTCCTCTG GACCTCAGCG GCCTGCTGCT GATCGCCGAG CAGATTCTCG TTGGCGCGGT GCTGGGTTTC TCGCTGCAAT TGTTCTTTCA AGCTTTCGTG GTGGCCGGGC AGATCGTCGC GATCCAGATG GGCATGGGCT TCGCGTCGAT GATCGACCCC ACCAACGGCG TGTCGGTGGC GGTGATCGGG CAGTTCTTCA CGATGCTGGT GACCTTGCTG TTCCTGTCGA TGAACGGGCA CCTGGTGGTC TTCGAAGTGC TCACCGAAAG CTTCACCACG CTGCCGGTCG GCGGCGGGTT GATGACCACG CATTACTGGG AACTGGCCGG CAAACTCGGC TGGGTGCTGG GCGCCGCGTT GTTGCTGGTG CTGCCGGCGG TCACCGCGCT GTTGGTGGTC AACATCGCGT TTGGCGTGAT GACCCGCGCC GCGCCGCAGC TCAACATTTT CTCCATCGGC TTTCCGCTGA CCCTCGTACT CGGCCTGTTC ATCGTCTGGG TCGGGCTGGC GGACATACTC AATCAGTATC AACCGCTGGC CACCGAGGCC TTGCAGTTTT TACGCGAACT GGCACAGGCG CGCTGA
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Protein sequence | MQSLLQLTDA QISTWVATFM LPLFRVASML MVMPVFGTTL VPRRIRLYFA FAITVVITPN LPPMPAVSPL DLSGLLLIAE QILVGAVLGF SLQLFFQAFV VAGQIVAIQM GMGFASMIDP TNGVSVAVIG QFFTMLVTLL FLSMNGHLVV FEVLTESFTT LPVGGGLMTT HYWELAGKLG WVLGAALLLV LPAVTALLVV NIAFGVMTRA APQLNIFSIG FPLTLVLGLF IVWVGLADIL NQYQPLATEA LQFLRELAQA R
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