Gene Pfl01_1533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1533 
Symbol 
ID3716997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1721306 
End bp1722517 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content64% 
IMG OID 
ProductPAS/PAC sensor Signal transduction histidine kinase 
Protein accessionYP_347265 
Protein GI77457760 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCAAG CCTCCCAGAT GTCTTCTGTT CCCGAGTCCT CGGGGCAACT GCCGTCCGTA 
GAGCAGGCGA GCCGCCAGGG GCTTGAGCAG GCATTCGCCC TGTTCAACCA GATGTCCAGC
CAGTTGACCG ATTCCTACAG CATGCTCGAA GCCCGGGTCA CCGAGCTCAA GGGCGAGCTG
GCCGTGGTCA GCGCCCAGCG CATGCAGGAA CTGGCGGAAA AAGAACGCTT GGCCAACCGT
CTGCAAAATC TCCTCGATCT GTTGCCCGGT GGCGTCATCG TCATCGACGG TCACGGCATT
GTGTGCGAGG CCAATCCTGC CGCCATCGAA TTGCTCGGCC TGCCGCTGGA AGGTGAGCTG
TGGCGCCATG TCATCGCCCG TTGCTTTGCG CCCCGTGAGG ACGACGGTCA CGAAATTTCC
TTGAAGAACG GTCGACGCCT GTCGATTGCC ACCCGCTCGC TGGATGCCGA GCCGGGGCAG
TTGGTGCTGC TCAACGACCT GACTGAAACC CGTCACTTGC AGGATCAGCT GGCCCGCCAC
GAGCGGCTGT CGTCCCTGGG GCGGATGGTC GCGTCGCTGG CGCATCAGAT CCGCACGCCA
TTGTCCGCCG CCTTGTTGTA CGCCAGTCAT TTGACCGAGC AGGAACTGCC GGTCGCCACC
CAGCAGCGTT TTGCCGGGCG CCTCAAGGAG CGCCTGCACG AACTGGAGCA TCAGGTGCGC
GACATGCTGG TCTTCGCCCG TGGCGAGCTG CCGCTGACCG ACCGTGTCAC GCCGAATGCC
TTGATGCAGT CGTTGCAGGC GGCGGCGCTG ACCCATGTGC AGGACCTGCC GATCCGCTGG
CAGTGCGACA GCCATGCCGG CGAGTTGCTG TGCAATCGCG ACACGCTGGT CGGGGCGCTG
CTCAATCTGA TTGAAAACGC CATTCAGGCG AGTGCTGGTG AGGTGCGTCT GAAGGTGCAT
TGCTATACCC GCGACAACAC CCTGCGTTTG TGTGTCAGTG ACAGCGGCAG CGGTATTGAT
GCGGCGGTGC TGGCGCGGCT GGGCGAGCCG TTTTTCACCA CCAAAGTTAC CGGGACCGGC
CTGGGCCTGA CCGTGGTCAA GGCCGTGGCG CGTGCGCATC AGGGAGAATT GCAGCTGCGT
TCGCGGGTCG GGCGCGGTAC GTGCGCGCAG GTCATCCTGC CGTTGTTTTC TGCTGTACAG
GGAGCTGAGT GA
 
Protein sequence
MPQASQMSSV PESSGQLPSV EQASRQGLEQ AFALFNQMSS QLTDSYSMLE ARVTELKGEL 
AVVSAQRMQE LAEKERLANR LQNLLDLLPG GVIVIDGHGI VCEANPAAIE LLGLPLEGEL
WRHVIARCFA PREDDGHEIS LKNGRRLSIA TRSLDAEPGQ LVLLNDLTET RHLQDQLARH
ERLSSLGRMV ASLAHQIRTP LSAALLYASH LTEQELPVAT QQRFAGRLKE RLHELEHQVR
DMLVFARGEL PLTDRVTPNA LMQSLQAAAL THVQDLPIRW QCDSHAGELL CNRDTLVGAL
LNLIENAIQA SAGEVRLKVH CYTRDNTLRL CVSDSGSGID AAVLARLGEP FFTTKVTGTG
LGLTVVKAVA RAHQGELQLR SRVGRGTCAQ VILPLFSAVQ GAE