Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1533 |
Symbol | |
ID | 3716997 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1721306 |
End bp | 1722517 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | PAS/PAC sensor Signal transduction histidine kinase |
Protein accession | YP_347265 |
Protein GI | 77457760 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCAAG CCTCCCAGAT GTCTTCTGTT CCCGAGTCCT CGGGGCAACT GCCGTCCGTA GAGCAGGCGA GCCGCCAGGG GCTTGAGCAG GCATTCGCCC TGTTCAACCA GATGTCCAGC CAGTTGACCG ATTCCTACAG CATGCTCGAA GCCCGGGTCA CCGAGCTCAA GGGCGAGCTG GCCGTGGTCA GCGCCCAGCG CATGCAGGAA CTGGCGGAAA AAGAACGCTT GGCCAACCGT CTGCAAAATC TCCTCGATCT GTTGCCCGGT GGCGTCATCG TCATCGACGG TCACGGCATT GTGTGCGAGG CCAATCCTGC CGCCATCGAA TTGCTCGGCC TGCCGCTGGA AGGTGAGCTG TGGCGCCATG TCATCGCCCG TTGCTTTGCG CCCCGTGAGG ACGACGGTCA CGAAATTTCC TTGAAGAACG GTCGACGCCT GTCGATTGCC ACCCGCTCGC TGGATGCCGA GCCGGGGCAG TTGGTGCTGC TCAACGACCT GACTGAAACC CGTCACTTGC AGGATCAGCT GGCCCGCCAC GAGCGGCTGT CGTCCCTGGG GCGGATGGTC GCGTCGCTGG CGCATCAGAT CCGCACGCCA TTGTCCGCCG CCTTGTTGTA CGCCAGTCAT TTGACCGAGC AGGAACTGCC GGTCGCCACC CAGCAGCGTT TTGCCGGGCG CCTCAAGGAG CGCCTGCACG AACTGGAGCA TCAGGTGCGC GACATGCTGG TCTTCGCCCG TGGCGAGCTG CCGCTGACCG ACCGTGTCAC GCCGAATGCC TTGATGCAGT CGTTGCAGGC GGCGGCGCTG ACCCATGTGC AGGACCTGCC GATCCGCTGG CAGTGCGACA GCCATGCCGG CGAGTTGCTG TGCAATCGCG ACACGCTGGT CGGGGCGCTG CTCAATCTGA TTGAAAACGC CATTCAGGCG AGTGCTGGTG AGGTGCGTCT GAAGGTGCAT TGCTATACCC GCGACAACAC CCTGCGTTTG TGTGTCAGTG ACAGCGGCAG CGGTATTGAT GCGGCGGTGC TGGCGCGGCT GGGCGAGCCG TTTTTCACCA CCAAAGTTAC CGGGACCGGC CTGGGCCTGA CCGTGGTCAA GGCCGTGGCG CGTGCGCATC AGGGAGAATT GCAGCTGCGT TCGCGGGTCG GGCGCGGTAC GTGCGCGCAG GTCATCCTGC CGTTGTTTTC TGCTGTACAG GGAGCTGAGT GA
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Protein sequence | MPQASQMSSV PESSGQLPSV EQASRQGLEQ AFALFNQMSS QLTDSYSMLE ARVTELKGEL AVVSAQRMQE LAEKERLANR LQNLLDLLPG GVIVIDGHGI VCEANPAAIE LLGLPLEGEL WRHVIARCFA PREDDGHEIS LKNGRRLSIA TRSLDAEPGQ LVLLNDLTET RHLQDQLARH ERLSSLGRMV ASLAHQIRTP LSAALLYASH LTEQELPVAT QQRFAGRLKE RLHELEHQVR DMLVFARGEL PLTDRVTPNA LMQSLQAAAL THVQDLPIRW QCDSHAGELL CNRDTLVGAL LNLIENAIQA SAGEVRLKVH CYTRDNTLRL CVSDSGSGID AAVLARLGEP FFTTKVTGTG LGLTVVKAVA RAHQGELQLR SRVGRGTCAQ VILPLFSAVQ GAE
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