Gene Pfl01_1521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1521 
Symbol 
ID3717024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1709609 
End bp1710304 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content62% 
IMG OID 
Productacylneuraminate cytidylyltransferase 
Protein accessionYP_347253 
Protein GI77457748 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.563927 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACAACG TCGCAATCAT CCCGGCCCGC GGGGGCAGCA AACGCATCCC GCGCAAGAAT 
CTCAAGCCGT TCGACGGTGT GCCGATGATT GTCCGTTCGA TTCGCACGGC CCTCGATTCT
GGGTTGTTCG AGCAAGTGGT GGTCAGCACC GACGACGCAG AGATCGCCGA CGTGGCGCGG
GCCAACGGTG CCCACGTGCC GTTCATGCGT CCGGCGGAGC TGGCCGATGA TTTCACCGGC
ACTGCGGCGG TGATCGTGCA TGCCTTGCAG CAACTGCCGG CCTTCGAATA CGCCTGCTGT
GTGTACGCCA CGGCGCCGCT GTTGCAGGCG CGCTTTCTGC GTCAGGGCTT TGAATTGCTG
GCGCAGCATC CGGACAAGTC CTTTGCTTTT TCGGTCACCG ATTTCGGCTT TCCTGTGCAG
CGCGCCTTGA CCCTCGACGG GCAGGGCGGC CTGACGGCGT TGTACCCCGA ATTTCGCAAT
ACCCGTTCGC AGGATCTGCC GGCTGCCTTT CAGGATGCCG GCCAGTTCTA TTGGGGCCGT
AGTCAGGCCT GGCTGGGTGG CGAGGTGCTG TATTCGCCGG CAAGTCTGCC GGTGATCCTG
CCCCGGTATC TGGTGCAGGA CATCGATACC GTCGAAGACT GGAAGCGTGC CGAGTACCTT
TACGCGGCAC TCAAGGCGGG CGGAGAACTG CAATGA
 
Protein sequence
MNNVAIIPAR GGSKRIPRKN LKPFDGVPMI VRSIRTALDS GLFEQVVVST DDAEIADVAR 
ANGAHVPFMR PAELADDFTG TAAVIVHALQ QLPAFEYACC VYATAPLLQA RFLRQGFELL
AQHPDKSFAF SVTDFGFPVQ RALTLDGQGG LTALYPEFRN TRSQDLPAAF QDAGQFYWGR
SQAWLGGEVL YSPASLPVIL PRYLVQDIDT VEDWKRAEYL YAALKAGGEL Q