Gene Pfl01_1405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1405 
Symbol 
ID3717200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1576642 
End bp1577394 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content64% 
IMG OID 
ProductLamB/YcsF family protein 
Protein accessionYP_347137 
Protein GI77457632 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCC TGCTATTGAA CTGTGACATC GGCGAGAGCT TCGGCAGCTG GACCATGGGT 
CTGGACGCGG AAGTCATGCC CTTCATCGAC TGCGCCAACA TTGCCTGCGG TTTCCACGCC
GGCGACCCGA GCATCATGCG CAAGACCGTC AGCCTGGCGT TGAGCCACGG CGTGAAGATC
GGCGCGCATC CGGCCTATCA GGATCTGGTG GGGTTCGGCC GACGTTCCAT GGCCTACACG
GCCCAGGAAC TGCAGGACAT CCTGCATTAC CAGATCGGCG CTCTCGACGG CATTTGCCGT
GCCCAGGGTG GCAAAGTCAG TTACGTCAAA CCCCACGGCG CGATGTACAA CGACATGATG
GCCAACCCGG CGCAGTTGCG CGCGGTGATT CAGGCCGTCG TGGCTTACGA TCGCAGCTTG
CCGTTGATGC TGATGGCCAC CCGCGACAAC ACGGCAGCCC AGCAACTCGG CGACGAATAC
GGCGTGACGC TGTGGTTCGA AGCCTTCGCC GACCGCGCCT ACGACAGCGC CGGCCGACTG
GTCTCGCGAC AACTGCCGGG CGCGGTGCAC CACGATTGCG AAACCATCAT CGGGCAAGCG
CTGACCATCG CCCGTGGCGA CAACCTCACC GCCAGCGACG GCAGCGCGCT GCACCTGCAA
GCCAACACTT TGTGCGTGCA CGGTGACAAC GCCAGCTCAG TGGCGGCCGT GCAGCGCATT
CGTCAGGCCT TGAACGAGCA GAGCGCGCCA TGA
 
Protein sequence
MSRLLLNCDI GESFGSWTMG LDAEVMPFID CANIACGFHA GDPSIMRKTV SLALSHGVKI 
GAHPAYQDLV GFGRRSMAYT AQELQDILHY QIGALDGICR AQGGKVSYVK PHGAMYNDMM
ANPAQLRAVI QAVVAYDRSL PLMLMATRDN TAAQQLGDEY GVTLWFEAFA DRAYDSAGRL
VSRQLPGAVH HDCETIIGQA LTIARGDNLT ASDGSALHLQ ANTLCVHGDN ASSVAAVQRI
RQALNEQSAP