Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1363 |
Symbol | |
ID | 3717233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1536755 |
End bp | 1537342 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | anti sigma-E protein, RseA |
Protein accession | YP_347095 |
Protein GI | 77457590 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0073652 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCGTG AAGCCCTGCA GGAATCGCTG TCCGCAGTGA TGGATAACGA AGCGGACGAA CTGGAATTGC GTCGAGTGCT CAATGCACTG GACGATGTTG AAACCCGTGA AACCTGGGCT CGTTATCAGA TCGCTCGGGC AGCCATGCAC AAGGATCTGT TGCTCCCACG TCTGGATCTT GCTGCGGCCG TTTCTGCTGC GCTGGAAGAC GAAGCAACTC CTGCCAAAGT GTCCCGCGGC CCATGGCGCA GCCTTGGTCG TCTGGCCGTA GCTGCCTCGG TGACCGTTGC CGTACTGGCG GGTGTTCGTC TGTACAATCA GGACGAAATC GCTGGCGTCG AACTCGCTCA GCAATCCAAT CAGCCAGTGC TGGCTACCCC TCAGGTAAAA GGCCCGGCGG TATTGGCAGG CTATAATGAG AGTTCTGAAG CTACTGGCCC AATGGCCAAT GGTGTACTGC AAGGTCAGCC AGGCTGGCAC GATCAGCGTC TGCCAGGTTA CCTGCGTCAA CACGCTCAAC AGGCTGCCTT GAAAGGCACC GAGAGCGCGC TGCCATATGC ACGTGCAGCA AGCCTGGAAA ACCGTTAA
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Protein sequence | MSREALQESL SAVMDNEADE LELRRVLNAL DDVETRETWA RYQIARAAMH KDLLLPRLDL AAAVSAALED EATPAKVSRG PWRSLGRLAV AASVTVAVLA GVRLYNQDEI AGVELAQQSN QPVLATPQVK GPAVLAGYNE SSEATGPMAN GVLQGQPGWH DQRLPGYLRQ HAQQAALKGT ESALPYARAA SLENR
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