Gene Pfl01_1363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1363 
Symbol 
ID3717233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1536755 
End bp1537342 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content58% 
IMG OID 
Productanti sigma-E protein, RseA 
Protein accessionYP_347095 
Protein GI77457590 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0073652 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCGTG AAGCCCTGCA GGAATCGCTG TCCGCAGTGA TGGATAACGA AGCGGACGAA 
CTGGAATTGC GTCGAGTGCT CAATGCACTG GACGATGTTG AAACCCGTGA AACCTGGGCT
CGTTATCAGA TCGCTCGGGC AGCCATGCAC AAGGATCTGT TGCTCCCACG TCTGGATCTT
GCTGCGGCCG TTTCTGCTGC GCTGGAAGAC GAAGCAACTC CTGCCAAAGT GTCCCGCGGC
CCATGGCGCA GCCTTGGTCG TCTGGCCGTA GCTGCCTCGG TGACCGTTGC CGTACTGGCG
GGTGTTCGTC TGTACAATCA GGACGAAATC GCTGGCGTCG AACTCGCTCA GCAATCCAAT
CAGCCAGTGC TGGCTACCCC TCAGGTAAAA GGCCCGGCGG TATTGGCAGG CTATAATGAG
AGTTCTGAAG CTACTGGCCC AATGGCCAAT GGTGTACTGC AAGGTCAGCC AGGCTGGCAC
GATCAGCGTC TGCCAGGTTA CCTGCGTCAA CACGCTCAAC AGGCTGCCTT GAAAGGCACC
GAGAGCGCGC TGCCATATGC ACGTGCAGCA AGCCTGGAAA ACCGTTAA
 
Protein sequence
MSREALQESL SAVMDNEADE LELRRVLNAL DDVETRETWA RYQIARAAMH KDLLLPRLDL 
AAAVSAALED EATPAKVSRG PWRSLGRLAV AASVTVAVLA GVRLYNQDEI AGVELAQQSN
QPVLATPQVK GPAVLAGYNE SSEATGPMAN GVLQGQPGWH DQRLPGYLRQ HAQQAALKGT
ESALPYARAA SLENR