Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1338 |
Symbol | |
ID | 3717285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 1512232 |
End bp | 1515864 |
Gene Length | 3633 bp |
Protein Length | 1210 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | allophanate hydrolase subunit 2 |
Protein accession | YP_347070 |
Protein GI | 77457565 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0387482 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTCGAAA AAGTCCTGAT TGCCAACCGT GGCGCGATTG CCTGCCGCAT TCTGCGCACC TTGCGTGAAC TGCACGTCGA AGGCGTCGCG GTGTACTCCG AAGCCGATGC CGCCAGCCTG CACATCCTGC AAGCGGACGA AGCCCACAGC CTCGGTGAAG GCGCCGCGGC CAGCACCTAT CTGGCCGTGG ACAAGATTCT CGCCATCGCC AAAGCCACTG GCGCCACCGC GATCCATCCG GGCTACGGCT TTCTTTCCGA GAACGCGGCG TTCGCCGAAG CCTGCGCCAA CCATGGCATT GCCTTCATCG GCCCGACACC GGAGCAACTG CGGGTGTTCG GCCTCAAGCA CACCGCACGG GCCCTGGCCA AACAGCACGG CGTGCCAATG CTCGAAGGCA CCGAACTGCT CGACAGCCTC GACGCCGCGC TGATTGCCGG CGCGCAGGTC GGTTATCCGG TGATGCTCAA AAGCACCGCC GGGGGCGGTG GCATCGGCAT GCGCGTGTGC CGTAACGCCA GCGAACTGAG CGAGTCGTTC GAGGCGGTGA AGCGCCTCGG CCAGAACAAC TTCAGCGACG CCGGAGTGTT CATCGAGAAG TACATCCAGC GTGCGCGGCA TCTGGAAGTC CAGGTGTTCG GCGACGGCCA AGGCGCAGTG ATCGCCCTCG GCGTGCGCGA CTGCTCGGTG CAGCGGCGCA ATCAGAAAGT CCTTGAGGAA ACCCCGGCAC CGAACCTGCC CGATGGCATG GCGGATGAGC TGTGCGCGGC GGCGATCAAA CTGGCCAAAG CAGTGAATTA CCGCAGCGCC GGCACCGTCG AATTCGTTTT CGACAGCGAT GCGCAGCGCT TCTATTTTCT GGAAGTGAAC ACCCGGTTGC AGGTTGAGCA CGGCGTTACC GAACAGGTGT GGGGCGTCGA TCTGGTGCGC TGGATGATTG AACTGGCGGC GGGAGATCTG CCGCCGCTGA GCACATTGTT TGAGGGCCTG AAACCGGACG GCCACGCGAT TCAGGCGCGG CTGTACGCGG AGGATCCGGG GCGCGATTTC CAGCCGAGCC CAGGGCTGCT GACCGCTGTG GAGTTTCCTG CGGCCAACGG CATTCAACTG CGCATCGACA CCTGGGTCGA GGCTGGCTGC GAGATCCCGC CCTACTTCGA TCCGATGATC GCCAAACTCA TCAGCTGGGC GCCAACCCGC GAACAGGCCC GCGCCGAACT GCACCAGGCC CTCGGCGACA GCCTGCTGTA CGGCGTGGAA ACCAACCGCG ACTACCTGCG GCAGATTCTG CTCGATACAC CGTTCGCCAG CGGTCAGCCC TGGACCCGTT GCCTGGAAGG TCTGGTGTAC CAGGCCAACA CCTTCGAAGT GCTGAGCGCC GGCACCCAGA CCAGCGTCCA GGACTACCCC GGCCGCCTCG GCTACTGGGC GGTGGGCGTG CCACCCTCGG GGCCGATGGA CAGTCGCGCG TTGCGTCTGG GCAATCGCTT GCTGGGCAAT GACGAAGGCG CGGCGGCACT GGAAATCACC ATGAACGGGC CGCTGCTGCG CTTCAATTGC GACGCGGTGG TGGCGGTGAC CGGGGCACCG TTGGCGCTGA CCCTCGACGG CGAAGCGGTG CCGATGAACA CCGCGCTGTT GATTGAAGCG GGCAGCCAGT TACATCTCGG CGGTTTGCTC GACGCCGGCG CCCGCAGCTA CCTGTGCCTG CGCGGCGGCC TGCAGGTGCC GGACTATCTG GGCAGCAAAA GCACCTTCAC CCTCGGTCAG TTCGGCGGTC ATGGCGGGCG AGCCCTGCGT GCCGGCGACG TGTTGCACCT GGCGCCCCTG AGCGACCGAA GCGCCGGGCA GACCCTGGCC CCGCATCACG TCAGCGAACT GCCCGCCGTG CGCCGGATCC GGGTGATCTA TGGCCCCCAC GGCGCGCCGG AATATTTCAC CGAACACTAC ATCGACACGT TCTTCGCCAC GCACTGGGAA GTGCACTTCA ACTCCAGCCG TACCGGCGTG CGCCTGATAG GACCAAAGCC GGAATGGGTG CGCGCCGACG GCGGTGAAGC CGGGCTGCAT CCGTCGAACA TTCACGACAA CCCCTATGCC ATTGGTGCGG TGGACTTCAC CGGCGACATG CCAGTGATCC TCGGTCCGGA CGGCCCGAGC CTTGGCGGTT TCGTGTGCCC GGTGACGGTG ATCGAAGCGG ATCTCTGGCA GCTCGGGCAA CTGAAGGCCG GGGACAAGGT GCAGTTTGAG CCGGTCGATC TCAAGACTGC CCGCGATCTC GCCCTGAAAT GGGATGCCTC CGAGAGCTGG CCAGCCAGCG ACGAAGTTGA CGCGGTGTCT GCTCGGGCCC CATCGCTGGC ATGCCAGCTC CCACAGGCCC TGGTTTCGCC TGTGATTCTG GAGTTGGGTC AGGGCGACAA GCGGCTGGTC GGGCGTGTGT CCGGCGATAC CCATCTGCTG CTGGAAATCG GCGCGCTGGA ACTGGATCTG GTCCTGCGCT TTCGCGCCCA TGCCCTGATG CAGGCGCTGG AAGGCAAAAA CCTGCACGGC GTGATCGACC TGACACCGGG CATTCGTTCG CTGCAGATCC ACTACCAGCC CGAACAACTG CCGCTGGCCG ATCTGCTCGG CATCGTCGCC GGTGAATGGG ATGCGGTGTG CGCCGCCCAG GACTTGCAAG TGCCGTCGCG GATCGTCCAC TTGCCCCTGT CGTGGGACGA CCCGGCCTGC CAGTTGGCGA TCGAGAAATA CATGACCACC GTGCGCAAGG ACGCGCCGTG GTGCCCGAGC AATCTGGAGT TCATCCGCCG CATCAACGAC CTGCCGAACC TCGATGAAGT GCAGCGCACG GTATTCGATG CGAGCTATCT GGTGATGGGC CTGGGTGACG TCTACCTTGG TGCGCCGGTC GCCACGCCGC TCGACCCGCG CCATCGGCTG GTGACCACCA AGTACAACCC GGCGCGCACC TGGACCGCCG AGAACTCGGT GGGCATCGGC GGCGCCTACA TGTGCGTGTA CGGCATGGAA GGCCCCGGCG GTTATCAGTT CGTCGGGCGC ACCTTGCAGA TGTGGAACCG CTATCGCGAA GTCGCCGCGT TCGACGGCAA ACCGTGGCTG CTGCGGTTTT TCGATCAGAT CCGTTTCTAC CCGGTCAGCG CCGAAGAACT GCTGCGCATC CGCCGGGATT TTCCCCTCGG TCGTTTCGAC CTCGACATCG AACATAGCCA GCTCAACCTC GGCGACTACC AGGCCTTTCT GCAACGCGAA GCCGAGACCA TCGACGCCTT CCGAACGCAG CAACAGGGCG CCTTCCAGGC GGAGCGCGAA CGCTGGATCG CCAGTGGCCA GGCGCACTTC GACAGCGAAG AAGCCGTGCC GGTCAGCAGC GAAGACACAC CGCTGACCAG CGGCCAGCAA AGCATCGACA GCCACATCGC CGGCAACCTC TGGCAGGTGC AGGTCGAGGT CGGCAGCCGC GTGGCGGCCG GTGATGTGCT GGTGATTCTG GAGTCGATGA AGATGGAAAT CCCCGTGCTC GCGCCCATGG CCGGGGTGGT GCAGGACATT CGCGTGCAGC CGGGATCGGC GGTGCGTGCC GGACAACGGG TCGTGGTGCT GGAACTCGAC TGA
|
Protein sequence | MFEKVLIANR GAIACRILRT LRELHVEGVA VYSEADAASL HILQADEAHS LGEGAAASTY LAVDKILAIA KATGATAIHP GYGFLSENAA FAEACANHGI AFIGPTPEQL RVFGLKHTAR ALAKQHGVPM LEGTELLDSL DAALIAGAQV GYPVMLKSTA GGGGIGMRVC RNASELSESF EAVKRLGQNN FSDAGVFIEK YIQRARHLEV QVFGDGQGAV IALGVRDCSV QRRNQKVLEE TPAPNLPDGM ADELCAAAIK LAKAVNYRSA GTVEFVFDSD AQRFYFLEVN TRLQVEHGVT EQVWGVDLVR WMIELAAGDL PPLSTLFEGL KPDGHAIQAR LYAEDPGRDF QPSPGLLTAV EFPAANGIQL RIDTWVEAGC EIPPYFDPMI AKLISWAPTR EQARAELHQA LGDSLLYGVE TNRDYLRQIL LDTPFASGQP WTRCLEGLVY QANTFEVLSA GTQTSVQDYP GRLGYWAVGV PPSGPMDSRA LRLGNRLLGN DEGAAALEIT MNGPLLRFNC DAVVAVTGAP LALTLDGEAV PMNTALLIEA GSQLHLGGLL DAGARSYLCL RGGLQVPDYL GSKSTFTLGQ FGGHGGRALR AGDVLHLAPL SDRSAGQTLA PHHVSELPAV RRIRVIYGPH GAPEYFTEHY IDTFFATHWE VHFNSSRTGV RLIGPKPEWV RADGGEAGLH PSNIHDNPYA IGAVDFTGDM PVILGPDGPS LGGFVCPVTV IEADLWQLGQ LKAGDKVQFE PVDLKTARDL ALKWDASESW PASDEVDAVS ARAPSLACQL PQALVSPVIL ELGQGDKRLV GRVSGDTHLL LEIGALELDL VLRFRAHALM QALEGKNLHG VIDLTPGIRS LQIHYQPEQL PLADLLGIVA GEWDAVCAAQ DLQVPSRIVH LPLSWDDPAC QLAIEKYMTT VRKDAPWCPS NLEFIRRIND LPNLDEVQRT VFDASYLVMG LGDVYLGAPV ATPLDPRHRL VTTKYNPART WTAENSVGIG GAYMCVYGME GPGGYQFVGR TLQMWNRYRE VAAFDGKPWL LRFFDQIRFY PVSAEELLRI RRDFPLGRFD LDIEHSQLNL GDYQAFLQRE AETIDAFRTQ QQGAFQAERE RWIASGQAHF DSEEAVPVSS EDTPLTSGQQ SIDSHIAGNL WQVQVEVGSR VAAGDVLVIL ESMKMEIPVL APMAGVVQDI RVQPGSAVRA GQRVVVLELD
|
| |