| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1327 |
|---|
| Symbol | |
|---|
| ID | 3717326 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 1501054 |
|---|
| End bp | 1501824 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | trans-aconitate methyltransferase, putative |
|---|
| Protein accession | YP_347059 |
|---|
| Protein GI | 77457554 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTGGT CCGCCAAGCA ATACGTCACT TTCGAAGATG AACGCACCCG CCCGGCCCGT
GACCTGCTGG CGGCGATTCC CACGCGGGAG GCGCGTTCCG TGGTCGATAT CGGTTGTGGC
CCCGGCAACT CGACCGAACT TCTGGTGGAG CGTTTTCCGG GGGCGAAAGT GCAGGGGCTC
GACAGTTCGC CGGACATGAT CGATGCCGCG CGCAAGCGTC TGCCGCAGTT GCAGTTCGCG
GTGGCGGACA TCGATAAATG GGCGGATGCG GGGCCATTCG ATGTGATCTT TGCCAACGCC
GTTTTGCAGT GGGTGCCGGA TCACGCGACG TTGCTGCCGT CCCTGGCGGG CAAGTTGGCG
CAGGGCGGCA GTCTGGCGAT TCAGATGCCG GACAACCTCA ACGAGCCGTC CCACCGGTTG
ATGCGTGAAG TGGCGGCCAA CGGGCCGTGG GCCAGCAAAC TGGCGGGCGC GGCGGGGCAG
CGGACCGAGA TGGCGGATGC CAGTGCCTAT TTCTCGATGC TGCGGCCGCA TTGCGCACGG
GTCGATGTGT GGCGCACTAC GTATCACCAT CAGTTGGCGG GCGGGGCTTC CGGCGTTGTC
GAGTGGTTCA AGGGTAGCGG TCTGATTCCG TTTCTCAGTC CGCTGACGGA AGCGGAGCGG
GCGGAGTATC TGGCGCACTA TCTGGCGGAG GTCGCCAAGG CCTATCCGGC GCTGGCGGAT
GGTTCGGTGC TGTTGCCGTT TCCACGGTTG TTCATTGTCG CCACACGTTG A
|
|---|
| Protein sequence | MTWSAKQYVT FEDERTRPAR DLLAAIPTRE ARSVVDIGCG PGNSTELLVE RFPGAKVQGL
DSSPDMIDAA RKRLPQLQFA VADIDKWADA GPFDVIFANA VLQWVPDHAT LLPSLAGKLA
QGGSLAIQMP DNLNEPSHRL MREVAANGPW ASKLAGAAGQ RTEMADASAY FSMLRPHCAR
VDVWRTTYHH QLAGGASGVV EWFKGSGLIP FLSPLTEAER AEYLAHYLAE VAKAYPALAD
GSVLLPFPRL FIVATR
|
|---|
| |