Gene Pfl01_1301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1301 
Symbol 
ID3717338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1477473 
End bp1478705 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content60% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_347033 
Protein GI77457528 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.206283 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTTA CCGCTCCTTC CGCATCTGCC AAACCGGCGC CCGATCACCA CGCCCGGTTC 
ATCGAGCTGC TGCAAACCAG CCTCGAACAG AACGGCTTTA TCAAACTGGT GCTGGCCAAA
TACGTCGGCG AAGAAGCGGA CCTGCAGCGG ATCATCATCA AGCCGGTGAC GGTCAAGGCG
CAGCCGTGCC TGTCGTTCGT TTATCGCTAC AAGACCCGCG ACATCACCAA GAACCTGCCA
TTGGACGAAG CAGTCACGAC GATTGCCGGG CTGTTGCCGG CGGCGTTCAA GAATGCGCAT
TTGCTGGCGC TGACGGACGA AGCCCAGCTC GAATACAGCA AAAAGGGCAA GAGCTCGCTG
TTCATGAGCA AACCTCAGCA ATTGCGTGAA GTGCCTTCCG CCGAGCACAA CCGCGAGAAG
AACCGCTATC TCGATCTGAA CCGGCCGTTC CTCAAGGATC TGGGCGTGAC CAATGCCCAG
CACGAGCTGA TTCCAGCGAT GTCGCGCAAG TGGAAGCAGA TCAACAAATT CATCGAAGTC
TTCAGCCACG CGCTGACCTC GTCGCCGCTG GCCCTGGACA AACCGGTGCG GGTGGCGGAT
TTCGGTTCAG GCAAGGGTTA CCTGACGTTC GCCATTCATG ACTATTTGCG CAACACCCTG
AAGGCCGAGG GCGAAGTCAC CGGCGTCGAG CTGCGTGAAG AGATGGTCAA CCTGTGCAAC
ACCGCTGCCG CGAAACTGGA ACACCCGGGG CTGGTGTTCA AATGCGGCGA TGTGCGCAGC
GTGGCGCCGA GCGAGCTGGA CGTGATGATC GCCCTGCATG CCTGCGACAT TGCCACCGAC
TACGCGATCC ACACCGGCAT CCGCTCCGGC GCCTCGATCA TCATGTGCTC GCCGTGCTGC
CACAAACAGA TCCGCTTGCA GATCCAGAGC CCGGCGCTGC TCAAGCCGAT GCTGCAATAT
GGCCTGCACC TGGGCCAGCA GGCGGAAATG GTTACCGACA GCCTGCGCGC GCTATTCCTC
GAAGCCTGCG GTTACGAGAC CAAGGTGTTC GAGTTCATCT CGCTGGACCA CACCAACAAG
AACAAGATGA TCCTCGCCGT GAAGCGCGCC GAGCCGGTGG ACCCGACTCA GCTGCTGGTG
AAGATTCAAG AGCTCAAGGC GTTCTACCAG ATCAGCGAGC ACTGCCTCGA AACCCTGCTG
CTCGCTGACG GCCTGCTGAC GCTCAAGGCT TGA
 
Protein sequence
MSVTAPSASA KPAPDHHARF IELLQTSLEQ NGFIKLVLAK YVGEEADLQR IIIKPVTVKA 
QPCLSFVYRY KTRDITKNLP LDEAVTTIAG LLPAAFKNAH LLALTDEAQL EYSKKGKSSL
FMSKPQQLRE VPSAEHNREK NRYLDLNRPF LKDLGVTNAQ HELIPAMSRK WKQINKFIEV
FSHALTSSPL ALDKPVRVAD FGSGKGYLTF AIHDYLRNTL KAEGEVTGVE LREEMVNLCN
TAAAKLEHPG LVFKCGDVRS VAPSELDVMI ALHACDIATD YAIHTGIRSG ASIIMCSPCC
HKQIRLQIQS PALLKPMLQY GLHLGQQAEM VTDSLRALFL EACGYETKVF EFISLDHTNK
NKMILAVKRA EPVDPTQLLV KIQELKAFYQ ISEHCLETLL LADGLLTLKA