Gene Pfl01_1283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1283 
Symbol 
ID3717359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1459558 
End bp1460721 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content66% 
IMG OID 
Productgeneral substrate transporter 
Protein accessionYP_347015 
Protein GI77457510 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTCT CGCTTCTCAT ACTCGCCTTG AGCGCCTTCG CCATCGGCAC CACCGAGTTC 
GTCATCATGG GCCTGCTGCC CAATGTGGCG GCTGACCTCG GTGTGTCGAT TCCCGGTGCC
GGCTGGCTGG TGACCGGCTA CGCCCTGGGC GTGGCGATTG GTGCACCGTT CATGGCAATG
GCCACTGCAA AACTGCCGCG CAAGGCTGCA CTGGTAACGC TGATGGGCAT TTTCATTATC
GGCAACCTGC TCTGCGCCAT CGCCACTGAC TACAACGTGC TGATGTTCGC CCGAGTGGTT
ACCGCCCTGT GTCACGGCGC GTTCTTCGGC ATCGGTTCGG TGGTCGCGGC CAACCTGGTG
GCGCCGAACA AACGCGCCTC GGCCGTGGCC CTGATGTTCA CCGGCCTGAC CCTGGCCAAC
GTGCTGGGCG TACCGCTGGG CACCGCGCTC GGTCAGGAAG CCGGCTGGCG CTCGACCTTC
TGGGCAGTGA CCGTGATCGG TGTGATCGCG CTGATCGGAC TGATCCGCTT CCTGCCGGCC
AAGCGTGACG AAGAAAAACT CGACATGCGC GCCGAACTGG CCGCGCTCAA GGGCGCCGGG
ATCTGGCTGT CGCTGAGCAT GACCGCGCTG TTCGCCGCCT CGGTGTTCAC GTTGTTCACC
TACGTCGCAC CGCTGCTGGG CGATGTCACC GGTGTTTCGC CCCGTGGCGT GACCTGGACC
CTGATGCTCA TCGGCCTGGG CCTGACTGTC GGCAACATCA TCGGCGGCAA ACTGGCCGAC
AAGGGCCTGG CCGCGACGCT GATCGGCGTG TTCATCGCCA TGGCCGTGAC CTCCACCGTC
CTGACCTGGA CCAGCATCGC GCTGATCCCG ACCGAGATCA CCCTGTTCCT CTGGGCCACC
GCGTGTTTCG CCGCGGTGCC GGCCCTGCAA GTGAACGTCG TGACCTACGG CCAGGCCGCA
CCGAACCTGG TGTCGACCCT GAACATCGGC GCCTTCAACG TCGGCAATGC CCTCGGCGCC
TGGGTCGGCG GCAGCGTCAT CGCCCACGGC TACGGCCTGA CCAGCGTGCC TCTCGCCGCT
GCAGCGCTGG CGGTTCTCGC GCTGCTGGTG ACCCTGATCA CATTCCGCCA GAACGGCAAT
CCCGAGCTGG CCACCGCTAA CTGA
 
Protein sequence
MPLSLLILAL SAFAIGTTEF VIMGLLPNVA ADLGVSIPGA GWLVTGYALG VAIGAPFMAM 
ATAKLPRKAA LVTLMGIFII GNLLCAIATD YNVLMFARVV TALCHGAFFG IGSVVAANLV
APNKRASAVA LMFTGLTLAN VLGVPLGTAL GQEAGWRSTF WAVTVIGVIA LIGLIRFLPA
KRDEEKLDMR AELAALKGAG IWLSLSMTAL FAASVFTLFT YVAPLLGDVT GVSPRGVTWT
LMLIGLGLTV GNIIGGKLAD KGLAATLIGV FIAMAVTSTV LTWTSIALIP TEITLFLWAT
ACFAAVPALQ VNVVTYGQAA PNLVSTLNIG AFNVGNALGA WVGGSVIAHG YGLTSVPLAA
AALAVLALLV TLITFRQNGN PELATAN