Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1273 |
Symbol | |
ID | 3717388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1446387 |
End bp | 1447751 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | 3-carboxy-cis,cis-muconate cycloisomerase |
Protein accession | YP_347005 |
Protein GI | 77457500 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.281218 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCAGC GACCGGGCAA TCAATTGTTC GATGCCTACT TTACTGCCCG CGATATGCGC GACGTGTTCT GCGATCAGGG CCGGGTGCAG GCGATGCTCG ACTTCGAAGC GGCGCTGGCC CGGGCCGAGG CGCGGGTCGG CTTGATTCCG GCGGATGCTG TCGCGGCCAT CGAAAACGCC TGCCGCGCCG GGCTGTTTGA TTTCGCAGCG CTGGGCGAGG CGATTGCCAC GGCCGGCAAT TCGGCGATTC CACTGGTCAA GGCATTGGGC AAACAGATTG CCGCGACCGA TGCCGAAGCC GAGCGCTATG TGCATCTGGG CGCCACCAGC CAGGACGTGA TGGATTCCGG GTTGGTGCTG CAATTGCGTC AGGCGCTGGA ATTGATTGAA AGGGAGTTGG GGCAACTGGC CGACGCCCTC GCCACTCAGG CGCAGCGCCA TGCCGCGACG CCGCTGGCAG GACGTACCTG GCTGCAACAT GCGACGCCGG TGACGCTCGG CATGAAGATC GCCGGTTGGC TCGGTGCGAT CACGCGCAGC CGTCAGCGTC TGCGCGAGCT CAAACCGCGA CTGCTGGTGC TGCAATTCGG CGGCGCGTCC GGCACCCTCG CGGCGCTCGG CGAACAGGCG TTGCCGATCG CCCAGGCGCT GGCCGAAGAA CTGCACCTGA ACCTGCCGGA ACAACCGTGG CACACCCAGC GCGATCGCAT CGTCGAGTTC GGCGCAGTAC TCGGGCTGAT CGCCGGCAGC CTCGGCAAGT TCGGCCGCGA CATCAGCTTG TTGATGCAGA CCGAAGCGGC GGAAGTGTTC GAGCCGTCGG CGCCGGGCAA GGGCGGTTCC TCGACCATGC CGCACAAGCG CAATCCGGTG GGCGCGGCGG TGTTGATCGG TGCCGCGACC CGGGTGCCGG GGCTGGTCTC GACGCTGTTC AGCGCCATGC CGCAGGAACA CGAGCGCAGC CTTGGTCTGT GGCACGCCGA ATGGGAAACC CTGCCGGAAA TCTGCTGCCT GGTGTCGGGC GCACTGCAAC AGGCGCGGCT GCTGGCCGAT GGTCTGGAAG TCGATGCCGC GCGCATGGCC CGCAACCTGG AGTTGACTCA AGGCCTGGTG CTGGCCGAAG CGGTGAGCAT CGTGCTCGCG CAACGGGTCG GTCGTGATAC CGCGCATCAT CTGCTCGAGC AATGCTGCAA ACGAGCGGTG GCCGAACAGC GTCACCTGCG TGCGGTTCTC GGTGACGAGC CGCAGGTGAC CGCCGAACTG AGCGCAAGCG AACTGGATCA TCTGCTGGAT CCCGCCCACT ACCTCGGTCA GGCGCAGGTC TGGGTCGAGC GGGCAGTAGC CGAACACAAC GCATTGTCTG ACTGA
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Protein sequence | MTQRPGNQLF DAYFTARDMR DVFCDQGRVQ AMLDFEAALA RAEARVGLIP ADAVAAIENA CRAGLFDFAA LGEAIATAGN SAIPLVKALG KQIAATDAEA ERYVHLGATS QDVMDSGLVL QLRQALELIE RELGQLADAL ATQAQRHAAT PLAGRTWLQH ATPVTLGMKI AGWLGAITRS RQRLRELKPR LLVLQFGGAS GTLAALGEQA LPIAQALAEE LHLNLPEQPW HTQRDRIVEF GAVLGLIAGS LGKFGRDISL LMQTEAAEVF EPSAPGKGGS STMPHKRNPV GAAVLIGAAT RVPGLVSTLF SAMPQEHERS LGLWHAEWET LPEICCLVSG ALQQARLLAD GLEVDAARMA RNLELTQGLV LAEAVSIVLA QRVGRDTAHH LLEQCCKRAV AEQRHLRAVL GDEPQVTAEL SASELDHLLD PAHYLGQAQV WVERAVAEHN ALSD
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