| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1273 |
|---|
| Symbol | |
|---|
| ID | 3717388 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 1446387 |
|---|
| End bp | 1447751 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | 3-carboxy-cis,cis-muconate cycloisomerase |
|---|
| Protein accession | YP_347005 |
|---|
| Protein GI | 77457500 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.281218 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCAGC GACCGGGCAA TCAATTGTTC GATGCCTACT TTACTGCCCG CGATATGCGC
GACGTGTTCT GCGATCAGGG CCGGGTGCAG GCGATGCTCG ACTTCGAAGC GGCGCTGGCC
CGGGCCGAGG CGCGGGTCGG CTTGATTCCG GCGGATGCTG TCGCGGCCAT CGAAAACGCC
TGCCGCGCCG GGCTGTTTGA TTTCGCAGCG CTGGGCGAGG CGATTGCCAC GGCCGGCAAT
TCGGCGATTC CACTGGTCAA GGCATTGGGC AAACAGATTG CCGCGACCGA TGCCGAAGCC
GAGCGCTATG TGCATCTGGG CGCCACCAGC CAGGACGTGA TGGATTCCGG GTTGGTGCTG
CAATTGCGTC AGGCGCTGGA ATTGATTGAA AGGGAGTTGG GGCAACTGGC CGACGCCCTC
GCCACTCAGG CGCAGCGCCA TGCCGCGACG CCGCTGGCAG GACGTACCTG GCTGCAACAT
GCGACGCCGG TGACGCTCGG CATGAAGATC GCCGGTTGGC TCGGTGCGAT CACGCGCAGC
CGTCAGCGTC TGCGCGAGCT CAAACCGCGA CTGCTGGTGC TGCAATTCGG CGGCGCGTCC
GGCACCCTCG CGGCGCTCGG CGAACAGGCG TTGCCGATCG CCCAGGCGCT GGCCGAAGAA
CTGCACCTGA ACCTGCCGGA ACAACCGTGG CACACCCAGC GCGATCGCAT CGTCGAGTTC
GGCGCAGTAC TCGGGCTGAT CGCCGGCAGC CTCGGCAAGT TCGGCCGCGA CATCAGCTTG
TTGATGCAGA CCGAAGCGGC GGAAGTGTTC GAGCCGTCGG CGCCGGGCAA GGGCGGTTCC
TCGACCATGC CGCACAAGCG CAATCCGGTG GGCGCGGCGG TGTTGATCGG TGCCGCGACC
CGGGTGCCGG GGCTGGTCTC GACGCTGTTC AGCGCCATGC CGCAGGAACA CGAGCGCAGC
CTTGGTCTGT GGCACGCCGA ATGGGAAACC CTGCCGGAAA TCTGCTGCCT GGTGTCGGGC
GCACTGCAAC AGGCGCGGCT GCTGGCCGAT GGTCTGGAAG TCGATGCCGC GCGCATGGCC
CGCAACCTGG AGTTGACTCA AGGCCTGGTG CTGGCCGAAG CGGTGAGCAT CGTGCTCGCG
CAACGGGTCG GTCGTGATAC CGCGCATCAT CTGCTCGAGC AATGCTGCAA ACGAGCGGTG
GCCGAACAGC GTCACCTGCG TGCGGTTCTC GGTGACGAGC CGCAGGTGAC CGCCGAACTG
AGCGCAAGCG AACTGGATCA TCTGCTGGAT CCCGCCCACT ACCTCGGTCA GGCGCAGGTC
TGGGTCGAGC GGGCAGTAGC CGAACACAAC GCATTGTCTG ACTGA
|
|---|
| Protein sequence | MTQRPGNQLF DAYFTARDMR DVFCDQGRVQ AMLDFEAALA RAEARVGLIP ADAVAAIENA
CRAGLFDFAA LGEAIATAGN SAIPLVKALG KQIAATDAEA ERYVHLGATS QDVMDSGLVL
QLRQALELIE RELGQLADAL ATQAQRHAAT PLAGRTWLQH ATPVTLGMKI AGWLGAITRS
RQRLRELKPR LLVLQFGGAS GTLAALGEQA LPIAQALAEE LHLNLPEQPW HTQRDRIVEF
GAVLGLIAGS LGKFGRDISL LMQTEAAEVF EPSAPGKGGS STMPHKRNPV GAAVLIGAAT
RVPGLVSTLF SAMPQEHERS LGLWHAEWET LPEICCLVSG ALQQARLLAD GLEVDAARMA
RNLELTQGLV LAEAVSIVLA QRVGRDTAHH LLEQCCKRAV AEQRHLRAVL GDEPQVTAEL
SASELDHLLD PAHYLGQAQV WVERAVAEHN ALSD
|
|---|
| |