| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1255 |
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| Symbol | |
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| ID | 3717409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 1428182 |
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| End bp | 1431028 |
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| Gene Length | 2847 bp |
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| Protein Length | 948 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | |
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| Product | ATP-dependent helicase HepA |
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| Protein accession | YP_346987 |
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| Protein GI | 77457482 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCAGC AGTATCAACC GGGGCAACGC TGGATCAGTG ACAGCGAAGC AGAGCTTGGT
TTAGGCACCG TTCTGGCACA GGACGGCCGC TTGTTGACCG TGCTTTACCC GGCCACTGGC
GAGACTCGCC AGTACGCGCT ACGGAATGCG CCCCTCACCC GCGTGCGGTT TTCGCCCGGC
GATTCGATCA CGCACTTCGA AGGCTGGAAG ATGACCGTCC AGCAAGTCGA CGACGTCGAC
GGCCTGATGG TCTACCACGG CCTCAACGCG CAGAACGAAG CGGTCACCCT GCCGGAAACC
CAACTGTCGA ACTTCATTCA GTTCCGTCTG GCCAGCGACC GTCTGTTCGC CGGCCAGATC
GACCCGCTGG CGTGGTTCTC CCTGCGTTAT CACACCCTGG AACACACCAG CCGCCAGTTG
CAGTCCGCGC TCTGGGGCCT GGGTGGCGTA CGCGCCCAAC CGATCGCCCA CCAGTTGCAC
ATTGCCCGTG AAGTCGCCGA CCGCATCGCG CCGCGCGTAT TGCTGGCGGA CGAAGTGGGT
CTGGGCAAGA CCATCGAAGC CGGTCTGGTG ATCCATCGTC AGTTGCTGTC GGGCCGCGCC
AACCGCGTAC TGATCCTGGT GCCGGAAAAC CTCCAGCACC AATGGCTGGT GGAAATGCGC
CGCCGCTTCA ACCTGCAGGT CGCGCTGTTC GACGAAGAAC GTTTCATCGA AAGCGATGCC
ACCAACCCGT TCGAAGACAC CCAGCTGGCC CTGGTGGCGC TGGAGTGGCT GGTCGACGAC
GAAAAGGCGC AAGACGCGTT GTTCGCTGCC GGTTGGGACC TGATGGTGGT CGACGAAGCC
CACCACCTGG TGTGGCACGA AGACAAAGTC AGCCCGGAAT ACTCGCTGGT CGAACAGCTG
GCCGAGGTCA TTCCCGGCGT GCTGCTGCTC ACCGCCACCC CGGAACAACT CGGTCAGGAC
AGCCACTTCG CCCGTCTGCG CCTGCTCGAC CCGAACCGTT TCCATGACCT GGCCGCCTTC
CGTGCCGAGA GCGAAAACTA TCGCCCGGTG GCCGAAGCCG TTCAGGAGCT GCTGGACAAG
GGTCGCCTGT CGCCGGCCGC GCACAAGACC ATCCACGGTT TCCTCGGCAA CGAAGGTGAA
GCCCTGCTCA CCGCCGTCAA CGATGGCGAC ACCGAAGCCA GCGCCCGCCT CGTGCGTGAA
CTGCTCGACC GCCACGGCAC CGGCCGCGTG CTGTTCCGTA ACACCCGCGC CGCCGTGCAG
GGTTTCCCGG AGCGCAAACT GCACCCGTAC CCGCTGCCGT GCCCGGACGA ATACCTCGAA
CTGCCGCTGG GCGAGCACGC CGAGCTGTAC CCGGAAGTCA GCTTCCAGGC CCAGCCGGAC
GCCAGCGAAG AAGAACGCTG GTGGAAATTC GACCCGCGCG TCGAGTGGCT GATCGACCAG
TTGAAAATGC TCAAGCGCAC CAAAGTGCTG GTGATCTGCG CCCACGCCGA AACCGCGATG
GACCTGGAAG ACGCCCTGCG CGTGCGCTCC GGGATCCCGG CCACGGTGTT CCACGAAGGC
ATGAACATCC TCGAGCGTGA CCGCGCCGCC GCCTACTTCG CCGACGAAGA GTTCGGCGCG
CAGGTGTTGA TCTGCTCGGA AATCGGCAGT GAAGGTCGCA ACTTCCAGTT CGCCCACCAC
TTGGTGCTGT TCGACCTGCC GTCGCACCCG GACCTGCTGG AGCAGCGGAT CGGTCGTCTC
GACCGGATCG GCCAGAAGCA CATCATCGAA CTGCACGTGC CGTACCTGGA AACCAGCCCG
CAAGAGCGCC TGTTCCAGTG GTACCACGAA GCCCTGAACG CGTTCCTCAA CACCTGCCCG
ACCGGCAACG CCTTGCAGCA TCAGTTCGGC CCGCGCCTGC TGCCGTTGCT CGAAGAGGCC
GACGACGGCG AATGGCAAGC GCTGATCGAC GAGGCGCGCA CCGAGCGCGA GCGTCTGGAA
GCCGAGCTGC ACACCGGTCG CGACCGCCTG CTGGAACTCA ACTCCGGCGG CGCCGGCGAA
GGTGAGGCGC TGGTCGAGGC CATCCTCGAG CAGGACGACC AGTTCGCCCT GCCGATCTAC
ATGGAAACCC TGTTCGACGC CTTCGGCATC GACAGCGAAG ACCATTCGGA AAACGCCCTG
ATCCTCAAGC CGAGCGAGAA GATGCTCGAC GCCAGCTTCC CGCTGGGCGA CGACGAAGGC
GTGACCATCA CCTACGACCG TAACCAGGCG CTGTCGCGCG AAGACATGCA GTTCATCACC
TGGGAACACC CGATGGTGCA GGGCGGCATG GATCTGGTGC TGTCCGGTTC GATGGGCAAC
ACCGCCGTCG CGCTGATCAA GAACAAGGCG CTCAAGCCGG GCACCGTGCT GCTGGAACTG
CTCTACGTCA GCGAAGTGGT TGCCCCGCGT TCGCTGCAAC TGGGCCGTTA CCTGCCGCCG
GCCGCCCTGC GCTGCCTGCT CGATGCCAAC GGCAACGACC TGTCGTCGCG CGTGGCGTTC
GAAACCCTCA ACGATCAACT GGAAAGCGTG CCGCGCGCCA GCGCCAACAA GTTCATCCAG
GCCCAGCGCG ATCAGCTGAC GCCACGGATC AACGCCGGTG AAGACAAGGT CACCCCGCGC
CACGCCGAGC GCGTGGCCGA GGCCCGCCGC CGTCTGGCAG CCGACACCGA CGAAGAACTG
GCACGCCTGA CCGCGTTGCA GGCGGTCAAC CCGACCGTGC GCGACAGCGA ACTGGACGCT
CTGCGCAAGC AGCGTGAACA AGGTCTGGCA ATGCTCGACA AGGCAGCGCT GCGACTGGAA
GCGATCCGGG TGCTGGTGGC GGGTTAA
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| Protein sequence | MAQQYQPGQR WISDSEAELG LGTVLAQDGR LLTVLYPATG ETRQYALRNA PLTRVRFSPG
DSITHFEGWK MTVQQVDDVD GLMVYHGLNA QNEAVTLPET QLSNFIQFRL ASDRLFAGQI
DPLAWFSLRY HTLEHTSRQL QSALWGLGGV RAQPIAHQLH IAREVADRIA PRVLLADEVG
LGKTIEAGLV IHRQLLSGRA NRVLILVPEN LQHQWLVEMR RRFNLQVALF DEERFIESDA
TNPFEDTQLA LVALEWLVDD EKAQDALFAA GWDLMVVDEA HHLVWHEDKV SPEYSLVEQL
AEVIPGVLLL TATPEQLGQD SHFARLRLLD PNRFHDLAAF RAESENYRPV AEAVQELLDK
GRLSPAAHKT IHGFLGNEGE ALLTAVNDGD TEASARLVRE LLDRHGTGRV LFRNTRAAVQ
GFPERKLHPY PLPCPDEYLE LPLGEHAELY PEVSFQAQPD ASEEERWWKF DPRVEWLIDQ
LKMLKRTKVL VICAHAETAM DLEDALRVRS GIPATVFHEG MNILERDRAA AYFADEEFGA
QVLICSEIGS EGRNFQFAHH LVLFDLPSHP DLLEQRIGRL DRIGQKHIIE LHVPYLETSP
QERLFQWYHE ALNAFLNTCP TGNALQHQFG PRLLPLLEEA DDGEWQALID EARTERERLE
AELHTGRDRL LELNSGGAGE GEALVEAILE QDDQFALPIY METLFDAFGI DSEDHSENAL
ILKPSEKMLD ASFPLGDDEG VTITYDRNQA LSREDMQFIT WEHPMVQGGM DLVLSGSMGN
TAVALIKNKA LKPGTVLLEL LYVSEVVAPR SLQLGRYLPP AALRCLLDAN GNDLSSRVAF
ETLNDQLESV PRASANKFIQ AQRDQLTPRI NAGEDKVTPR HAERVAEARR RLAADTDEEL
ARLTALQAVN PTVRDSELDA LRKQREQGLA MLDKAALRLE AIRVLVAG
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