Gene Pfl01_1231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1231 
Symbol 
ID3717080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1403197 
End bp1403661 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content62% 
IMG OID 
Productsurface antigen protein 
Protein accessionYP_346963 
Protein GI77457458 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.302793 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAAGT CTGTTCTGCT GGTTGCTTCC TTTTCCACGA TGGCGATGTT GCTGACCGGC 
TGCCAGTCGA GCCTGACCGG TGACTCCTAC TCCCGTGACG AAGCGCGTCG CGTGCAGACG
ATTCGCATGG GCACCATCGA ATCCCTGCGT CCGGTGAAAA TCGAAGGCAC CAAGACCCCG
ATCGGCGGCG CTGCCGGTGC AGTGGTTGGC GGCGTCGGTG GCAGCGCGAT CGGCGGCGGC
AAAGGCAGCA TCGTTGCAGC CGTTATCGGT GCCGTGGCTG GCGGCCTGAT CGGTTCGGCC
ACTGAAGAAG GCCTGACTCG CACTCAGGGT GTTGAAATCA CCGTGCGCGA AGACGACGGC
AGCATGCGCG CCTATGTGCA GCAAGTGCAG GAGAATGAAG TGTTCCGTGT GGGTGAGCGG
GTACGGATTT CCACCGTTGG CGGGACCAGC CGCGTTTCGC ACTAA
 
Protein sequence
MRKSVLLVAS FSTMAMLLTG CQSSLTGDSY SRDEARRVQT IRMGTIESLR PVKIEGTKTP 
IGGAAGAVVG GVGGSAIGGG KGSIVAAVIG AVAGGLIGSA TEEGLTRTQG VEITVREDDG
SMRAYVQQVQ ENEVFRVGER VRISTVGGTS RVSH