Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1229 |
Symbol | |
ID | 3717078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1402141 |
End bp | 1402788 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | pyridoxamine 5'-phosphate oxidase |
Protein accession | YP_346961 |
Protein GI | 77457456 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCCAGT CTCTGGCAGA TATGCGTCGT GATTACACCC GGGATGGCCT GACCGAGGCG CAAGCCCCGG CGGAGCCCTT TGCGTTGTTT CACCAGTGGT TTGCCGAAGC GGTCAAAACC GAGCAGGCGC CGGTGGAAGC CAACGCCATG ACCCTGGCCA CGGTGGATGC GGACGGCCGG CCGCATTGCC GCATTCTGCT GCTCAAGGGG CTGGACGAGC AGGGCTTCAC CTTCTTCACC AACTACGAAA GTGCCAAGGG CCAGCATCTG GCGGCGAACC CGTTCGCCGC CATGACGTTC TTCTGGCCGA CCCTTGAGCG CCAGGTGCGC ATCGAAGGTC GGGTGGTGAA GGTCACACCC GAAGAGTCCG ACGCTTATTA TCAGGTGCGA CCGCTGGGCA GCCGACTTGG CGCCTGGGCT TCACCGCAGA GCCGGGTGAT CAACGGCCGG GGTGAGCTGG AAGATTTGCT CAAGGCGACC GAGCAACGCT TCACCGACAC TCAGCCTCAC TGCCCGGAAC ACTGGGGTGG CTACCGCCTG CTCCCCGAGC GCGTGGAATT CTGGCAGGGC CGGGCGAGCC GCCTGCACGA TCGCCTCAAC TACCGTGTGC AGGGCGCCGA CTGGATTCTT GAACGTCTGG CACCCTAA
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Protein sequence | MTQSLADMRR DYTRDGLTEA QAPAEPFALF HQWFAEAVKT EQAPVEANAM TLATVDADGR PHCRILLLKG LDEQGFTFFT NYESAKGQHL AANPFAAMTF FWPTLERQVR IEGRVVKVTP EESDAYYQVR PLGSRLGAWA SPQSRVINGR GELEDLLKAT EQRFTDTQPH CPEHWGGYRL LPERVEFWQG RASRLHDRLN YRVQGADWIL ERLAP
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