Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1202 |
Symbol | dcd |
ID | 3716974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1374064 |
End bp | 1374630 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | deoxycytidine triphosphate deaminase |
Protein accession | YP_346934 |
Protein GI | 77457429 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.421617 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATCA AATCGGACAA GTGGATTCGC CGCATGGCGC AGGAACACGG CATGATCGAG CCGTTCGTCG AGCGCCAGGT ACGTGGCAGT GACGACAGCC GTGTGATCTC CTACGGTGTG TCGAGCTACG GCTACGATGT GCGTTGCACC AATCATTTCA AGGTGTTCAC CAACATCAAT TCGGCCATCG TCGATCCGAA AAACTTCGAC GCCGGCAGTT TTGTCGACGT CCACAGCGAT GTCTGCATCA TTCCGCCGAA CTCCTTTGCC TTGGCCACGA CCGTTGAATA CTTCCGTATT CCACGCAACG TCCTGACCAT CTGCCTGGGC AAGAGCACTT ACGCCCGTTG CGGCATCATC GTCAACGTCA CCCCGCTCGA GCCCGAGTGG GAAGGCCAGG TGACCCTGGA GTTCTCCAAC ACCACCAACC TGCCGGCGAA GATCTACGCG AATGAAGGCG TGGCGCAGAT GCTGTTCCTC GAATCCGACG AGGAATGCGA AGTGTCCTAC AAGGACCGTG CCGGCAAATA CCAGGGCCAG CGTGGCGTGA CCCTGCCGCG CACCTGA
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Protein sequence | MSIKSDKWIR RMAQEHGMIE PFVERQVRGS DDSRVISYGV SSYGYDVRCT NHFKVFTNIN SAIVDPKNFD AGSFVDVHSD VCIIPPNSFA LATTVEYFRI PRNVLTICLG KSTYARCGII VNVTPLEPEW EGQVTLEFSN TTNLPAKIYA NEGVAQMLFL ESDEECEVSY KDRAGKYQGQ RGVTLPRT
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