| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1130 |
|---|
| Symbol | pcm |
|---|
| ID | 3716708 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 1306541 |
|---|
| End bp | 1307218 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | protein-L-isoaspartate O-methyltransferase |
|---|
| Protein accession | YP_346862 |
|---|
| Protein GI | 77457357 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.491382 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCGTG AACAAGACGA CAGGCTGCGC AGCGGCATCG GGATGACGTC CCAGCGAACC
CGTGAGCGCC TGATCCAGCG TCTGTACGAA GAGGGCGTTT CCAACGCCAG CGTGCTGGAA
GTGATCCGCC GCACCCCGCG ACACCTGTTC GTCGATGAAG CGCTGGCGCA TCGTGCCTAT
GAAGACACCG CGCTGCCGAT CGGCAACAAC CAGACCATTT CCCAGCCTTA TATGGTGGCG
CGCATGAGCG AGCTGCTGCT GGAAGCCGGG CCGCTGGATA AGGTGCTGGA GATCGGCACC
GGATCCGGTT ACCAGACGGC AGTGTTGTCG CAGTTGGTCG AGCGGGTGTT CTCGGTAGAG
CGCATCAAGG TGCTGCAGGA TCGGGCCAAG GAACGCCTGA TCGAGCTCAA CCTGCGCAAC
GTGGTATTTC GCTGGGGCGA TGGTTGGGAA GGGTGGCCGG CGCTAGCGCC GTACAACGGC
ATCATCGTCA CGGCGGTCGC CACCGATGTG CCTCAGGCTT TGCTTGATCA ACTGGCACCG
GGTGGGCGGA TGGTGATCCC GGTCGGTTCG GGCGAAGTGC AGCAATTGAT GCTGATCGTG
CGCGAAGAAA ACGGTTTCTC CCGACACGTT CTGGGGGCGG TGCGTTTCGT GCCATTGCTC
AACGGTCCGC TGGCCTGA
|
|---|
| Protein sequence | MAREQDDRLR SGIGMTSQRT RERLIQRLYE EGVSNASVLE VIRRTPRHLF VDEALAHRAY
EDTALPIGNN QTISQPYMVA RMSELLLEAG PLDKVLEIGT GSGYQTAVLS QLVERVFSVE
RIKVLQDRAK ERLIELNLRN VVFRWGDGWE GWPALAPYNG IIVTAVATDV PQALLDQLAP
GGRMVIPVGS GEVQQLMLIV REENGFSRHV LGAVRFVPLL NGPLA
|
|---|
| |