Gene Pfl01_1118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1118 
Symbol 
ID3716542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1294524 
End bp1295852 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content64% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_346850 
Protein GI77457345 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCAGC CCTCGATTGA CTTGCCTTCC AGGCTTCTGC GCAATCTCAA GCCCTGGCTC 
GGTGCTTCCC ATTGGCGCAT CGCCTTCTCC GGTGGCCTCG ATTCCACCGT TCTGCTGCAC
CTCCTGGCCA AACTCGCCAA AAACCAATCC ATTCCGGCGC TAAGCGCCAT CCATGTCCAT
CACGGTCTTC AGGCTGCGGC CGACGCATGG CCTGCGCATT GTCAGGCTGT TTGCGAGGAA
CTGGCGGTGC CGTTGCAAGT GCAGCGTGTG CAGGTGCAGC CGGGGGCGAG TGTAGAGCGC
GCGGCACGGG ATGCACGCTA TGCGGCGTTC AGTGCGGCGA CTCAGGCCAA TGACGTGCTG
CTGACCGGGC AGCATCGCGA CGATCAGGCT GAAACGCTGT TGTTCCGTCT GCTGCGTGGC
GCCGGCGTGC GTGGGTTGTC CGGAATGCCG GCCACGCGAG CGCTGGGGCA GGGCAGTCTG
GTGCGGCCGT TGCTCGACGT CACACGCGCA GAGTTGGAAG CCTATGCGCG GGACCATGGC
CTGCGTTGGA TCGAGGATCC GTCGAATCAG GATCGACAGT TCTCTCGCAA TTATCTGCGC
CATCAGATCA TGCCGCTGCT GATCGGCCGC TGGCCGCAGG CACACGCCAG CATGGCCCGC
AGCGCGGCGC ATCTGCGTGA GGCGCAGGGC TTGCTTGATG AGCTGGCACA AATCGATCTG
ACTCAAGCAA GTTTGCCCAG CGAGTTCGAA TGGTCGGGAT TGCCATCGCT GGAGTTTGCG
GCCATCGCGA AATTGTCCGA TGCCCGTCAG CGAAATGCAC TCAGCCACTG GCTTGAGCCG
TTGACCCGAC TGCCGGATAC CGACCATTGG TCGGGTTGGG TCGATGTGCG TGACGCCGGC
AACGATGCCT CGCCGATCTG GCGTCTGGCG GATGGCGAGC TGCATCGAAG CGCCGGCCGC
TTGTGGTGGC TCAGCGGGGA ATGGCTACGC ACACCGGTGG TCAGCGGCGA CTGGCATGAC
CTGTCGTCAG CGCTACGCTT GCCCGATAAC GGACGTGTCA TGTTCAGCGG CCAGACTCCC
GTCGGGCCGC TGCACATCCG CTATCGGCAG GGCGGCGAGG TAATGGACCT GGCGGGTCGC
GGTCATCGCG ATCTCAAGCG CCTGCTCAAT GAGCGCGCGG TGCCGGGCTT CGTGCGTGGC
AGATTGCCGC TGCTGTTTCG CGGTGAAGAA TTGCTCGCCG TGGCGAACCT GCCGGGGCTC
GACGGCAATG CGCTGGAAGG CTGGCGATTG CATTGGCAGC CTTCGGACGA AGATCAAGGT
TTGAGATGA
 
Protein sequence
MGQPSIDLPS RLLRNLKPWL GASHWRIAFS GGLDSTVLLH LLAKLAKNQS IPALSAIHVH 
HGLQAAADAW PAHCQAVCEE LAVPLQVQRV QVQPGASVER AARDARYAAF SAATQANDVL
LTGQHRDDQA ETLLFRLLRG AGVRGLSGMP ATRALGQGSL VRPLLDVTRA ELEAYARDHG
LRWIEDPSNQ DRQFSRNYLR HQIMPLLIGR WPQAHASMAR SAAHLREAQG LLDELAQIDL
TQASLPSEFE WSGLPSLEFA AIAKLSDARQ RNALSHWLEP LTRLPDTDHW SGWVDVRDAG
NDASPIWRLA DGELHRSAGR LWWLSGEWLR TPVVSGDWHD LSSALRLPDN GRVMFSGQTP
VGPLHIRYRQ GGEVMDLAGR GHRDLKRLLN ERAVPGFVRG RLPLLFRGEE LLAVANLPGL
DGNALEGWRL HWQPSDEDQG LR