Gene Pfl01_1090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1090 
Symbol 
ID3716495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1262327 
End bp1263139 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content64% 
IMG OID 
ProductUBA/THIF-type NAD/FAD binding fold 
Protein accessionYP_346822 
Protein GI77457317 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACAG AAGATCCGCG GTTTGCAGGC ATCGCCCGTT TGTATGGCAT CGAGGGCCTC 
GAGCGCCTGC GTGCAGCCCA CGTGGCGATT GTCGGCGTTG GCGGCGTCGG TTCCTGGGCG
GCGGAAGCGA TGGCCCGTTG TGGGGTGGGC GAGATTTCGC TGTTCGACCT CGACGACGTC
TGCGTCAGCA ACGCCAACCG CCAGTTGCAC GCGCTCGACA GCACGGTCGG CAAACCCAAG
GTCGAGGTGA TGGCCGAGCG TCTGCGCGGG ATCAACCCGG ACTGCACGGT GCACGCCGTG
GCGGACTTCG TCACCCGCGA CACCATGGCC GAATACATCA CGCCGAACAT CGACTGCGTG
ATCGACTGCA TCGACGCGGT CAACGCAAAA GCCGCGCTGA TCGCCTGGTG CAAACGGCGC
AAGATCCAGA TCATCACCAC TGGCGGCGCC GGCGGGCAGA TCGATCCGAC GCTGATTCAG
GTCTGCGACC TCAACCGTAC GTTCAATGAT CCTCTGGCCT CGAAAGTGCG CTCCACGCTG
CGTCGTGACT ATGGTTTCTC GCGCACTGTG ACTCGCCATT ACAGCGTGCC GTGCGTGTTC
TCCACCGAAC AGCTGCGCTA TCCGAAACCG GACGGCAGCA TCTGCCTGCA GAAGAGTTTT
GTCGGCGACG GCGTGAAGCT GGACTGCGCC GGCGGGTTTG GCGCGGTGAT GATGGTGACG
GCGACGTTCG GCATGGTCGC GGCGACCAAG GCTGTAGACA AGATTGTGGC GGGTGTTCGG
CGCCCGGCGG ATCGGGTCAA GCCTCAGGCC TGA
 
Protein sequence
MSTEDPRFAG IARLYGIEGL ERLRAAHVAI VGVGGVGSWA AEAMARCGVG EISLFDLDDV 
CVSNANRQLH ALDSTVGKPK VEVMAERLRG INPDCTVHAV ADFVTRDTMA EYITPNIDCV
IDCIDAVNAK AALIAWCKRR KIQIITTGGA GGQIDPTLIQ VCDLNRTFND PLASKVRSTL
RRDYGFSRTV TRHYSVPCVF STEQLRYPKP DGSICLQKSF VGDGVKLDCA GGFGAVMMVT
ATFGMVAATK AVDKIVAGVR RPADRVKPQA