Gene Pfl01_1055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1055 
Symbol 
ID3716204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1222600 
End bp1223283 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content66% 
IMG OID 
ProductCheW protein 
Protein accessionYP_346787 
Protein GI77457282 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.610069 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCGT CCGACACCTT GAACGTCACC CACGAAGACG CCCGGGCCAT CGACGATTGC 
TGGAACCGCA TCGGCATCCA CGGCGACAAG TCCTGTCCGC TGCTGGATGA GCACATCCAT
TGCCGCAATT GCTCGGTGTA TTCCGCCGCC GCCACGCGCC TGCTCGACCG CTATGCGTTG
CAGCAGGACG AGCGCGATCC GGTGGCGATC CAGGTCGAGA CCGAGCTGAA GACCCGTTCG
CTGCTGATGT TCCGCCTCGG CGAAGAATGG CTCGGTCTGG CCACCCGCAG TCTGGTGGAG
GTCGCGCCGT TGCAGGCGAT TCACTCGCTG CCGCACCAGC GCTCCCGGGC CTTGCTCGGC
GTGGCGAACG TGCGCGGTGC GCTGGTGGCG TGCCTGTCAC TGGTCGAACT GCTCGATCTC
GACAGCAGCG CAGCCCCGGC GACCGGCGCG CGGATCATGC CGCGCATGCT GATCATCGCG
GCCCAGGGCG GGCCGGTGGT GGTGCCGGTT GACGAAGTCG ACGGGATTCA CGCCATCGAC
GAGCGAATCC TCGACGCCGC GTCACGTTCC GGCGCACAGG CCAGTGCCAA ATACACCCGA
GGCGTGTTGC CTTTCAAAGG TCGCAGCCTG CGTTGGCTGG ATGAAGAACA GCTGTTGTCC
GCCGTGTCCC GGAGCCTCAC ATGA
 
Protein sequence
MIPSDTLNVT HEDARAIDDC WNRIGIHGDK SCPLLDEHIH CRNCSVYSAA ATRLLDRYAL 
QQDERDPVAI QVETELKTRS LLMFRLGEEW LGLATRSLVE VAPLQAIHSL PHQRSRALLG
VANVRGALVA CLSLVELLDL DSSAAPATGA RIMPRMLIIA AQGGPVVVPV DEVDGIHAID
ERILDAASRS GAQASAKYTR GVLPFKGRSL RWLDEEQLLS AVSRSLT