Gene Pfl01_1020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1020 
SymbolrimM 
ID3716022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1184704 
End bp1185240 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content56% 
IMG OID 
Product16S rRNA-processing protein RimM 
Protein accessionYP_346752 
Protein GI77457247 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.104306 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.553883 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGA CGCCAGAAAA AGCTGATGAC CTGATCGTTG TCGGCAAGAT TTTTTCGGTT 
CACGGCGTTC GCGGCGAGGT GAAGGTCTTT TCCTTTACCG ATCCGATTGA AAACCTGTTG
GGCTATCGCA ACTGGACGCT TCGGCGCGAA GGCGTGGTGA AACAGGTCGA GCTGGTCAGC
GGCCGATCCA CTCAAAAGGA TCTGGTTGTA AAGCTCAAAG GCCTCGACGA TCGCGATGAA
GCCCGTCTTC TGAGCGGTTA CGAGATTTGC ATCCCGCGAA GCCTTTTGCC CGACCTGACT
GCCGACGAGT ACTACTGGTA CCAGTTGGAG GGTCTGAGCG TCATCAACCA GGACGAACAA
TTGTTCGGCA AGGTTGATCA CCTGTTGGAG ACCGGCGCGA ACGATGTATT GGTGGTCAAG
CCCTGCGTTG GCAGCCTGGA TGATCGCGAG CGGTTGTTGC CCTATACGGA GCAATGCGTG
CTGGCAATCG ACCTGGAAGC AGGCGTGATG AGGGTGGAAT GGGACGCGGA CTTCTAA
 
Protein sequence
MSATPEKADD LIVVGKIFSV HGVRGEVKVF SFTDPIENLL GYRNWTLRRE GVVKQVELVS 
GRSTQKDLVV KLKGLDDRDE ARLLSGYEIC IPRSLLPDLT ADEYYWYQLE GLSVINQDEQ
LFGKVDHLLE TGANDVLVVK PCVGSLDDRE RLLPYTEQCV LAIDLEAGVM RVEWDADF