Gene Pfl01_1007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1007 
Symbol 
ID3716009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1173368 
End bp1174171 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content62% 
IMG OID 
ProductGntR family transcriptional regulator 
Protein accessionYP_346739 
Protein GI77457234 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.497463 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.979022 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGTGG TATTAGGTTT CGCCCGACTA CCGAGCGACA ACAATCCTAT ATCAGCGCCG 
GAAATGCCTT ACATGAATGA CCTCCACGCC CTACGCCCCG ACGATTCCCA GCCGACGCCG
CTGTACCTGC AACTGGCGCG CAACCTGGAA GCCGCGATCC ATGCCGGCCA GTGGAAAGCC
GAACAGGCGA TGCCCTCGGA GCGCAATCTC AGCGAGATGC TGGGGATTTC CCGGGTCACC
GCGCGCAAAG CGCTGGAAGT CCTGCTCGAT CAAGGTTTGA TCCGCCGCCT GCAAGGCTCC
GGCACCTTCA TCACCCCACG CCTTGAACAA CCGCTGTCGC GCCTCTCGGG TTTCAGCGAA
ATGCTCCGTC TCAAGGGCTT CGTGCCCAGC TCGCAATGGC TGGAGCGGGA AATCACCCTG
CCGACCCACG AAGAACTGAT CCGCCTCGGC CTGTCGCCGA ACGACAAGGT CGCGCGCATG
AAACGCCTGC GCAAGGCCGA CGACACCGTG ATGGCCATCG AGATGAGCAC CCTGCCCGCC
TCGATCATGC CCAAGCCACA GGTGGTGGGC GATTCCCTCT ACGAACACCT CGACAGCATC
GGCAAGCCGA TCGTGCGCGC CTTGCAGCAC ATCCAGGCGA TCAACGCCTC GGACGAGTTC
GCCGCACTCG TCGGCATCGC CCCCGGCACC GCGATGCTGC TGATGACCCG GGTCGGCTAC
CTGGAAGACA ACACGCCGAT CGAAGTCACC GACACCTATT GCCGCAACGA CTACTACGAC
TTTGTTGCAG AGCTTCGCCG CTGA
 
Protein sequence
MQVVLGFARL PSDNNPISAP EMPYMNDLHA LRPDDSQPTP LYLQLARNLE AAIHAGQWKA 
EQAMPSERNL SEMLGISRVT ARKALEVLLD QGLIRRLQGS GTFITPRLEQ PLSRLSGFSE
MLRLKGFVPS SQWLEREITL PTHEELIRLG LSPNDKVARM KRLRKADDTV MAIEMSTLPA
SIMPKPQVVG DSLYEHLDSI GKPIVRALQH IQAINASDEF AALVGIAPGT AMLLMTRVGY
LEDNTPIEVT DTYCRNDYYD FVAELRR