Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1007 |
Symbol | |
ID | 3716009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 1173368 |
End bp | 1174171 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | GntR family transcriptional regulator |
Protein accession | YP_346739 |
Protein GI | 77457234 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.497463 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.979022 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGTGG TATTAGGTTT CGCCCGACTA CCGAGCGACA ACAATCCTAT ATCAGCGCCG GAAATGCCTT ACATGAATGA CCTCCACGCC CTACGCCCCG ACGATTCCCA GCCGACGCCG CTGTACCTGC AACTGGCGCG CAACCTGGAA GCCGCGATCC ATGCCGGCCA GTGGAAAGCC GAACAGGCGA TGCCCTCGGA GCGCAATCTC AGCGAGATGC TGGGGATTTC CCGGGTCACC GCGCGCAAAG CGCTGGAAGT CCTGCTCGAT CAAGGTTTGA TCCGCCGCCT GCAAGGCTCC GGCACCTTCA TCACCCCACG CCTTGAACAA CCGCTGTCGC GCCTCTCGGG TTTCAGCGAA ATGCTCCGTC TCAAGGGCTT CGTGCCCAGC TCGCAATGGC TGGAGCGGGA AATCACCCTG CCGACCCACG AAGAACTGAT CCGCCTCGGC CTGTCGCCGA ACGACAAGGT CGCGCGCATG AAACGCCTGC GCAAGGCCGA CGACACCGTG ATGGCCATCG AGATGAGCAC CCTGCCCGCC TCGATCATGC CCAAGCCACA GGTGGTGGGC GATTCCCTCT ACGAACACCT CGACAGCATC GGCAAGCCGA TCGTGCGCGC CTTGCAGCAC ATCCAGGCGA TCAACGCCTC GGACGAGTTC GCCGCACTCG TCGGCATCGC CCCCGGCACC GCGATGCTGC TGATGACCCG GGTCGGCTAC CTGGAAGACA ACACGCCGAT CGAAGTCACC GACACCTATT GCCGCAACGA CTACTACGAC TTTGTTGCAG AGCTTCGCCG CTGA
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Protein sequence | MQVVLGFARL PSDNNPISAP EMPYMNDLHA LRPDDSQPTP LYLQLARNLE AAIHAGQWKA EQAMPSERNL SEMLGISRVT ARKALEVLLD QGLIRRLQGS GTFITPRLEQ PLSRLSGFSE MLRLKGFVPS SQWLEREITL PTHEELIRLG LSPNDKVARM KRLRKADDTV MAIEMSTLPA SIMPKPQVVG DSLYEHLDSI GKPIVRALQH IQAINASDEF AALVGIAPGT AMLLMTRVGY LEDNTPIEVT DTYCRNDYYD FVAELRR
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