Gene Pfl01_1006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1006 
Symbol 
ID3716008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1172231 
End bp1173337 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content64% 
IMG OID 
ProductN-acetylglucosamine 6-phosphate deacetylase 
Protein accessionYP_346738 
Protein GI77457233 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.699339 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.995231 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAG ACAACATCCT CACCGCTGAC GGCTGGATTC GCGGCCGGCT GATCCACGAA 
CACGGCAGAG TCGTGTCGAT CGAAGGCGAG CCTTGCGATC CGGCGACCAA TGACTTGCCG
TATCTGCTGC CGGGTTTCAT CGACCTGCAC GTCCACGGCG GTGGCGGCAA GGACATCATG
GAAGGCGCCA GCGCGTTCGA GACCATCACC AAGACCCACG TGCGCTTCGG CACCACCTCG
CTGCTGGCCA CCACGATGAC CGCGCCGAGA GCCGAGATTG CCAGCGTGCT CAAGGAGGTC
GGCGAGTTCT GCGAGCAGCG TCCGAAAGGT GCTGCCCGAG TCCTCGGCGT GCACCTCGAA
GGCCCGTACA TCAATCCCGG CAAACTCGGC GCCCAGCCGA ACTTCGCCCA CACCGCGTTG
ATGGCCGAAG TTGAAGACTA TCTGGCGCTG GCGCCGATCC GGGTGATCAC CATCGCCCCG
GAAATCGCCG GCCATGACGG ATTGATTCGT GAACTGAGCC GCCGTGGCAT CCGCATGCAG
ATCGGTCATA CCCTCGGCAG TTACGAGGAA GGCGTCGCCG CCCTCGAAGC CGGCGCCACC
AGTTTCACCC ACTTGTACAA CGCCATGAGC CCGCTGCATC ACCGCGAGCC GGGTATCGTC
GGTGCGGCGC TGGCCCACGC CAAATTCGCC GAACTGATTC CGGACTTGCT GCACGTGCAC
CCCGGCGCGA TCCGCGTGGC TCTGCGCTCG ATTCCGTGCC TGTACTGCGT CACCGATTCG
ACCGCCGCCG CCGGCATGCC CGACGGCGAA TACAAGCTCG GCAGCCACAC CGTCACCAAA
TGCCTGGGCG GCGTGCGCCT GCCCGATGGC ACCCTGGCCG GCAGCACCCT GACCATGGAT
CAGGCCCTGC GCAATCTGGT GAAGATCGGT TTGCCGATCG CCGAAGCCTC GCAACGTCTT
TCGCAATTCC CCGCCGACTA CCTCGGCATC ACCGAACGCG GGCGCCTTGC ACCTGGCGCC
TGGGCCGACT GCGTGCGGCT GGATCGCTCA CTCACACTGA CCGCCGTCAT GGTCGAAGGA
GAAGACATTG ACTTCAAAAA TGCTTGA
 
Protein sequence
MSEDNILTAD GWIRGRLIHE HGRVVSIEGE PCDPATNDLP YLLPGFIDLH VHGGGGKDIM 
EGASAFETIT KTHVRFGTTS LLATTMTAPR AEIASVLKEV GEFCEQRPKG AARVLGVHLE
GPYINPGKLG AQPNFAHTAL MAEVEDYLAL APIRVITIAP EIAGHDGLIR ELSRRGIRMQ
IGHTLGSYEE GVAALEAGAT SFTHLYNAMS PLHHREPGIV GAALAHAKFA ELIPDLLHVH
PGAIRVALRS IPCLYCVTDS TAAAGMPDGE YKLGSHTVTK CLGGVRLPDG TLAGSTLTMD
QALRNLVKIG LPIAEASQRL SQFPADYLGI TERGRLAPGA WADCVRLDRS LTLTAVMVEG
EDIDFKNA