Gene Pfl01_0990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0990 
Symbol 
ID3715973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1151097 
End bp1152218 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content62% 
IMG OID 
Productpermease YjgP/YjgQ 
Protein accessionYP_346722 
Protein GI77457217 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.171814 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.796458 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCGTCT TCCGTTATCT GTCCCGCGAA GTCCTGTTGA CCCTGAGTGC GGTAAGCGCC 
GTGCTGCTGG TCATCATCAT GAGCGGTCGC TTCATCAAAT ACCTTGCCCA GGCCGCCGCG
GGCCAGCTCG ATCCGGGATC GCTGTTCCTG ATCATGGGCT ATCGCCTGCC GGGCTTCATG
CAGTTGATCC TGCCGCTGGG GCTGTTCCTC GGGATTCTGC TGGCGTACGG CCGGCTGTAC
CTCGAAAGCG AGATGACCGT GCTTTCGGCC ACCGGCATGA GTCAGCAGCG GTTGTTCCGC
ATGACCCTGT TTCCGGCCAC CCTGGTAGCT GTGGTGGTGG CCTGGCTGAG CTTGAGCCTG
GCACCGCAAG GCGCCAACCA GTTCCAGCTG CTGCTGAACA AACAGGATGC CCTGACCGAA
TTCGACACCC TCGAGCCGGG CCGTTTCCAG GCCTTGCGCG ACGGTACGCG GGTGACCTAC
ACCGAAACCC TCAGCGATGA CCGGGTCAAC CTCGGCAGCG TATTCATCTC GCAGAAGAAC
CTCGGTGCCA ACCAGAAGGA TCGCGGGATT TCCGTGCTGG TGGCGGAGAA AGGTCGTCAG
GAAGTGCGTC CCGACGGCAA CCGTTACCTG ATCCTCGACA ACGGCTACCG CTACGACGGC
AGCCCGGGTC AGGCCAACTA TCGCGCCATC CACTACGAAA CCTACGGCGT GCTGCTGCCC
AAGCCGGATG TCAGCGAGGA AGTCACCGAC CGTGACGCCA TGCCGACCTC GTCCCTGCTC
GGCAGTGACG ACATTCGCTC GAAAACCGAA CTGCAATGGC GCCTGTCGCT GCCGTTGCTG
GTGTTCATCG TGACCCTGAT GGCGGTGCCG CTGTCGCGGG TCAATCCGCG TCAGGGGCGT
TTCCTCAAGC TGCTGCCGGC GATTCTTCTT TATATGGCTT ACCTGACCAT CCTGATTGCC
GCCCGCGGCG CCCTCGAGAA AGGCAAGATT CCACCGGCGC TCGGCTTGTG GTGGGTGCAT
GCGATCTTCC TGACGATCGG TCTCGGTCTG TTGTACTGGG AGCCTTTGCG CCTGAAGCTG
GCCAGCCGTC GCAGCGCAGC GCTGGAGGTG GCCCGTGGTT AA
 
Protein sequence
MIVFRYLSRE VLLTLSAVSA VLLVIIMSGR FIKYLAQAAA GQLDPGSLFL IMGYRLPGFM 
QLILPLGLFL GILLAYGRLY LESEMTVLSA TGMSQQRLFR MTLFPATLVA VVVAWLSLSL
APQGANQFQL LLNKQDALTE FDTLEPGRFQ ALRDGTRVTY TETLSDDRVN LGSVFISQKN
LGANQKDRGI SVLVAEKGRQ EVRPDGNRYL ILDNGYRYDG SPGQANYRAI HYETYGVLLP
KPDVSEEVTD RDAMPTSSLL GSDDIRSKTE LQWRLSLPLL VFIVTLMAVP LSRVNPRQGR
FLKLLPAILL YMAYLTILIA ARGALEKGKI PPALGLWWVH AIFLTIGLGL LYWEPLRLKL
ASRRSAALEV ARG