Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0990 |
Symbol | |
ID | 3715973 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1151097 |
End bp | 1152218 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | permease YjgP/YjgQ |
Protein accession | YP_346722 |
Protein GI | 77457217 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.171814 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.796458 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATCGTCT TCCGTTATCT GTCCCGCGAA GTCCTGTTGA CCCTGAGTGC GGTAAGCGCC GTGCTGCTGG TCATCATCAT GAGCGGTCGC TTCATCAAAT ACCTTGCCCA GGCCGCCGCG GGCCAGCTCG ATCCGGGATC GCTGTTCCTG ATCATGGGCT ATCGCCTGCC GGGCTTCATG CAGTTGATCC TGCCGCTGGG GCTGTTCCTC GGGATTCTGC TGGCGTACGG CCGGCTGTAC CTCGAAAGCG AGATGACCGT GCTTTCGGCC ACCGGCATGA GTCAGCAGCG GTTGTTCCGC ATGACCCTGT TTCCGGCCAC CCTGGTAGCT GTGGTGGTGG CCTGGCTGAG CTTGAGCCTG GCACCGCAAG GCGCCAACCA GTTCCAGCTG CTGCTGAACA AACAGGATGC CCTGACCGAA TTCGACACCC TCGAGCCGGG CCGTTTCCAG GCCTTGCGCG ACGGTACGCG GGTGACCTAC ACCGAAACCC TCAGCGATGA CCGGGTCAAC CTCGGCAGCG TATTCATCTC GCAGAAGAAC CTCGGTGCCA ACCAGAAGGA TCGCGGGATT TCCGTGCTGG TGGCGGAGAA AGGTCGTCAG GAAGTGCGTC CCGACGGCAA CCGTTACCTG ATCCTCGACA ACGGCTACCG CTACGACGGC AGCCCGGGTC AGGCCAACTA TCGCGCCATC CACTACGAAA CCTACGGCGT GCTGCTGCCC AAGCCGGATG TCAGCGAGGA AGTCACCGAC CGTGACGCCA TGCCGACCTC GTCCCTGCTC GGCAGTGACG ACATTCGCTC GAAAACCGAA CTGCAATGGC GCCTGTCGCT GCCGTTGCTG GTGTTCATCG TGACCCTGAT GGCGGTGCCG CTGTCGCGGG TCAATCCGCG TCAGGGGCGT TTCCTCAAGC TGCTGCCGGC GATTCTTCTT TATATGGCTT ACCTGACCAT CCTGATTGCC GCCCGCGGCG CCCTCGAGAA AGGCAAGATT CCACCGGCGC TCGGCTTGTG GTGGGTGCAT GCGATCTTCC TGACGATCGG TCTCGGTCTG TTGTACTGGG AGCCTTTGCG CCTGAAGCTG GCCAGCCGTC GCAGCGCAGC GCTGGAGGTG GCCCGTGGTT AA
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Protein sequence | MIVFRYLSRE VLLTLSAVSA VLLVIIMSGR FIKYLAQAAA GQLDPGSLFL IMGYRLPGFM QLILPLGLFL GILLAYGRLY LESEMTVLSA TGMSQQRLFR MTLFPATLVA VVVAWLSLSL APQGANQFQL LLNKQDALTE FDTLEPGRFQ ALRDGTRVTY TETLSDDRVN LGSVFISQKN LGANQKDRGI SVLVAEKGRQ EVRPDGNRYL ILDNGYRYDG SPGQANYRAI HYETYGVLLP KPDVSEEVTD RDAMPTSSLL GSDDIRSKTE LQWRLSLPLL VFIVTLMAVP LSRVNPRQGR FLKLLPAILL YMAYLTILIA ARGALEKGKI PPALGLWWVH AIFLTIGLGL LYWEPLRLKL ASRRSAALEV ARG
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