Gene Pfl01_0945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0945 
Symbol 
ID3715790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1097298 
End bp1098122 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content62% 
IMG OID 
Productshort chain dehydrogenase 
Protein accessionYP_346677 
Protein GI77457172 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGTTG CGTTGATTAC CGGTTGTTCC AGCGGCATCG GCCGCGCCCT CGCCGATGCC 
TTCAAAAATG CCGGCTACGA GGTCTGGGCC AGTGCACGCA AAGTTGAAGA TGTCGCGACA
CTCGGCGCTG CCGGATTTAC CGCCGTGCAG CTCGACGTCA ATGACAATGC CGCGCTGGAA
CAGCTCGCCG AGCGAATCAA TCAGCAACAC GGCGGCCTCG ATGTGCTGAT CAACAATGCC
GGTTACGGCG CCATGGGGCC GCTGCTCGAC GGCGGTGTTT CAGCCATGCA GCGCCAGTTC
GAAACCAACG TGTTTTCGAT TGTCGGCGTG ACCCGTGCGC TGTTCCCGGT GCTGCGCCGG
GCCAAAGGCC TGGTGGTGAA TGTCGGCAGT GTTTCCGGGG TGCTGGTCAC GCCATTTGCC
GGCGCCTATT GCGCCTCGAA AGCGGCGGTG CATGCGTTGA GCGATGCGTT GCGCATGGAG
CTGGCGCCGT TCGGAATTCG CGTGATGGAA GTGCAGCCGG GGGCGATTCA GTCCAGCTTC
GCCAAGAATG CCGGGCATGA GGCCGAACAA CTGATCAACG AACAATCGCC GTGGTTTCCG
TTGCGCGAAG GCATCCGGGC GCGGGCCAAA GCGTCCCAGG ACAAACCGAC GCCAGCCAGC
GAATTTGCCG CCGAATTGCT CAAGGCTGTG CAGCAGAGCA AGCCACCGCG ACTGATCCGC
ATCGGCAATG GCAGCCGGGC GTTGCCGTTG CTGGCGACGT TACTGCCGAA GGGGTTGCTG
GAGTCGACAT TGATGAAGCG CTTCGGCTTG CGCCGGCAAC TCTGA
 
Protein sequence
MPVALITGCS SGIGRALADA FKNAGYEVWA SARKVEDVAT LGAAGFTAVQ LDVNDNAALE 
QLAERINQQH GGLDVLINNA GYGAMGPLLD GGVSAMQRQF ETNVFSIVGV TRALFPVLRR
AKGLVVNVGS VSGVLVTPFA GAYCASKAAV HALSDALRME LAPFGIRVME VQPGAIQSSF
AKNAGHEAEQ LINEQSPWFP LREGIRARAK ASQDKPTPAS EFAAELLKAV QQSKPPRLIR
IGNGSRALPL LATLLPKGLL ESTLMKRFGL RRQL